Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1347 ATGGGTGGGAATTCCCCATGTGCATCATGCAAACTTCTGAGACGCCGCTGCACAAAAGATTGCACCTTTGCTCCTTATTTCCCTTCAGATGACCCGCAAAAGTTCGCCATAGTTCACAAGGTTTTTGGTGCTAGCAATGTTAGCAAAATGTTGCAGGAACTTCCGGTTCATCAGAGAGCTGATGCAGTGAGCAGTTTAGTGTATGAGGCAAATGCAAGAGTGAGGGACCCGGTGTATGGTTGTGTTGGAGCTATATCTTATCTTCAAAACCAGGTTTCAGAGCTTCAGATGCAGCTTGCAGTTGCTCAAGCAGAGATACTGTGTATCCAGATGCAACATGAGCCAATAGTGATGCCAAATCAAGAAATCATGGACTTGGATCACAAATCTTACCTTCTCCATAATGAACTCCCCCAATTCCTTAATTTTGGCTCTTCTAGCAATGTAATTCATGATTCTCTCAAGATAGAGAACATTTTTGGACATGACATGGTTTCTTGA 501 0.4311 MGGNSPCASCKLLRRRCTKDCTFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHEPIVMPNQEIMDLDHKSYLLHNELPQFLNFGSSSNVIHDSLKIENIFGHDMVS* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1347 166 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lan9g1347 166 Coils Coil 85 105 - -
Lan9g1347 166 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lan9g1347 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 1 156 - -
Lan9g1347 166 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1347 Lan-Chr9 20614068 20615109 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1347 3 133 AS2 family AT2G30130 82.707 1.29e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan9g1347 LOB 8.6e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1347 - - lang:109360574 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0230 11 1462844 1463874 Lan9g1347 9 20614068 20615109 LSH