Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1345 ATGAGAGGATATGAACCTCGTTCAAGTTCTTCTTGTGCAGCCTGCAAGTTTTTGAAGAGAAGATGCATACCGAATTGTATATTTGCACCTTACTTTCGCTCTGATGAGTGCAAGAAATTTGCCAAGGTGCACAAAGTTTTTGGTGCTAGCAATGTAAGCAAGATCCTGATTGAAGTGCCAGAGGAACATAGGGAAGATACTGTGAATTCACTGGCTTATGAAGCAGAAGCAAGGCTTAAGGATCCTGTTTATGGATGCATTGGTGCTATTGCTTTGTTGCAAAGGAAAATGGTGGAACTTCAACATGATCTTGCAATTGCTAAGGATCGTCTTGCTCTATATGCTGCTGCAAATACTACTACTACTACTACACCTTCTAATGATTTCTTCAATAATCATGTTAGTTTGCCACCCTTACCTGATTTCTATACTTGCAGTGATTTCAATGACAGCTTCAGCAACAGTTCTCCATCTCAATCATTGAGCCGACATGAAACAACTGTGGATGATTTCATTCAAATTCCTTATATATTTTAA 537 0.3892 MRGYEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEHREDTVNSLAYEAEARLKDPVYGCIGAIALLQRKMVELQHDLAIAKDRLALYAAANTTTTTTPSNDFFNNHVSLPPLPDFYTCSDFNDSFSNSSPSQSLSRHETTVDDFIQIPYIF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1345 178 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lan9g1345 178 Coils Coil 90 110 - -
Lan9g1345 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 171 - -
Lan9g1345 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 1 171 - -
Lan9g1345 178 Pfam Lateral organ boundaries (LOB) domain 11 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1345 Lan-Chr9 20603565 20604329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1345 1 128 AS2 family AT3G11090 72.656 1.50e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan9g1345 LOB 1.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1345 - - gmx:100803403 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0235 11 1493361 1494110 Lan9g1345 9 20603565 20604329 LSH