Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1341 ATGATGAACTCCACTGCCATATTCAATGGCGTAGATCGCGTGAAGGGTTCATGGACACCGCAAGAAGACGAAACGCTGTTGAGGCTTGTGGCACAACACGGCCCACGTAACTGGACGGTGATCAGCGCTGGGATCTCTGGGCGTTCCAGCAAGTCGTGTCGTCTAAGGTGGTGTAATCAGCTGAGTCCCGACGTGCAGCACCGTTCTTTTACCCCAGCGGAGGACAGTATCATCATCAATGCTCATGCACTTTACGGTAACAAGTGGGCCACGATTTCAAGACTCTTACCAGGACGAACTGATAATGCTATAAAGAATCATTGGAATTCAACCCTCCGCCGCCATGGTTTGGCACAGGGATACTCTTCCTCCGAGTCCGACATCGTGGTGAACAAGAAGCGCGTCACAAATGACTTTCTCATCCGTAGTTATCCTTCCAAGAGGCCTTATAGGGAGAATCATTTCCCAGAGAATAAGAAAGGTTTGGGTTCAGGTTTTGCTGAGAATATTCATAGTATTCCTGTTACGACGCCGTTGAGTCTATGGCCGCCGGGTGCGGCGGAGAAGGAAGAAGAGGAAGAAGAAGAAAGTGATGAAGTTGAAGGGAAGGGTGAAAAGGTGAAT 624 0.4952 MMNSTAIFNGVDRVKGSWTPQEDETLLRLVAQHGPRNWTVISAGISGRSSKSCRLRWCNQLSPDVQHRSFTPAEDSIIINAHALYGNKWATISRLLPGRTDNAIKNHWNSTLRRHGLAQGYSSSESDIVVNKKRVTNDFLIRSYPSKRPYRENHFPENKKGLGSGFAENIHSIPVTTPLSLWPPGAAEKEEEEEEESDEVEGKGEKVN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1341 208 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Lan9g1341 208 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Lan9g1341 208 PANTHER MYB PROTEIN-RELATED 7 197 - -
Lan9g1341 208 CDD SANT 69 112 IPR001005 -
Lan9g1341 208 Gene3D - 69 115 - -
Lan9g1341 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Lan9g1341 208 MobiDBLite consensus disorder prediction 175 208 - -
Lan9g1341 208 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lan9g1341 208 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Lan9g1341 208 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan9g1341 208 CDD SANT 17 59 IPR001005 -
Lan9g1341 208 Gene3D - 14 66 - -
Lan9g1341 208 SMART sant 66 114 IPR001005 -
Lan9g1341 208 SMART sant 14 63 IPR001005 -
Lan9g1341 208 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 7 197 - -
Lan9g1341 208 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1341 Lan-Chr9 20584495 20585572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1341 11 122 MYB Transcription Factor Family AT4G37260 67.857 8.60e-53 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan9g1341 Myb_DNA-binding 3.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1341 - - gmx:778069 210.69