Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1337 ATGGCTGTGTCAAACGATGTAGAAGCAGTGATAGAGTTTTTAAGGAAGAACGGTCTTTCAGAGGCTGAGTCAGCACTAAGACAAGACATCATAGAGAAGGGAAGTTCCGGTGATGCTGATCTGGCAACCTTTGACTATGAAAACTTCTTCTTTCCTATGGTCCCTCCTCCACCGCCGGTCAAGCTCCGATCATCGGAACCTGCCGGAACACTCTTTTCTGCTTCTTCTGATGATGAGTTTGTTAGCATAGGTTCATTCACTTCTCGTGTCTCTTCTTCAGAGTTCATAAATCCATATGGAATCCGTTCCTCATCTCAGACTCAGAATGATTCTGAGTCTTCGTCAGATAGGTTGTCTCAATTTGGCACAGCACGTGATTATCACGATTTTGATATGCAAAATGAACCACATTGGTATAATGAAAAGGATGATGAATGCTTCATGACCCCTAATTTTAAAGGGCTGGATTTCTTTGGGTGTCAGGCTGGGGATAAGTTTGTCATACCAGCAGAAAATGAGAACGAGCATGACCATTCTTCGGGTCTTGATCACAAAAATGAAGAATTGCGATTAGAGGGAAATGGTGGTTACATGGACAAGGCATGCCTTTATAATCATTCATCAGTAGCAGATGGAAATGTGACTTATTCAGAAGGCTACTGTCATATGGATAATAAAGACCATTTTGATGGAGATCCTACAAACTTCAGTTATCCTAATTTGAAGGAAATTCATATGAACGATTTTCTCTTGAAGGTTGTTGGGGATATTACTTCTTTTGATTCTGAATCACAGCATACTATGAATCAAAATTTTGACTACGACACTAAAAAAGACAATACTAAGGGGTACAAGGGTCCTTATGACTTAACTATCGAACTTGCTGAAACTGATCCACCAAATGGACTTGACATCTATGAAGCTCGACATGGGGGAGAACTTTCTGAAGAGTGCCAAGATCCAGAGACTGCAGCAGCTGGAGAGGATACTACTGATGATGAGCTCTTGAAGTATATTCACGATGATGAATATGAAGTATTTGACCTGAGAATTATACATAGAAAGAACAGGACTGGATTTGAAGAAAACAAGGAACTGCCCATTGTGCTAAACACAATCATAGCTGGGAGGTATTATATAACAGAATATCTTGGTTCAGCTGCTTTCAGTAGAGTTGTTCAGGCACATGATCTTCAGACAGGAGTAGATGTCTGCTTGAAGATTATTAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAAATCAAGCTTCTGAAACTTGTTAATAAGCATGACCCAACAGATGAACGCCACATATTGCGACTCTATGACTATTTCTACCATCAGGAGCATTTATTTCTTGTTACTGAGCTTCTGCGCGCAAACTTATATGAATTTCAGAAATTCAACCAAGAATCTGGAGGGGAAGCATATTTTACATTAAACAGGTTGCAGATAATTACTCGTCAATGTTTGGAAGCATTGCAATACTTGCATAACTTGGGAATTGTCCACTGTGATCTGAAGCCAGAAAATATTCTTATCAAAAGTTACAAAAGATGTGAGATAAAGGTTATCGATCTTGGAAGCAGTTGCTTTCAAACAGACCATCTGTGCCTTTATGTACAATCCCGATCCTATCGAGCTCCTGAAGTGATGTTAGGCCTTCAATATGATGAAAAGATTGACATGTGGTCTCTTGGTTGTATATTGGCTGAGCTATGCTCCGGTGAAGTGCTCTTTCCCAATGATGCAGTTGTGATGATTCTCGCACGCATGATTGGAATGCTTGGTCCTATTGACCTGGACATGTTGGCGAAAGGAGAGGAAACACACAAGTACTTCACCAAAGAATATGATATTTATCATGTGAATGAGGAGACTAATCAACTGGAGTACATAATTCCGGAGGAGTCATCATTGGAACAACACCTACAAGTTACTGATACTATGTTTATAGACTTTGTCAAATGCTTGCTTAGCATCAACCCCAAAAGAAGGCCCACTGCAAGACAAGCATTAAAGCATCCATGGCTTTCCAATATTTACAAGTCATGA 2061 0.3979 MAVSNDVEAVIEFLRKNGLSEAESALRQDIIEKGSSGDADLATFDYENFFFPMVPPPPPVKLRSSEPAGTLFSASSDDEFVSIGSFTSRVSSSEFINPYGIRSSSQTQNDSESSSDRLSQFGTARDYHDFDMQNEPHWYNEKDDECFMTPNFKGLDFFGCQAGDKFVIPAENENEHDHSSGLDHKNEELRLEGNGGYMDKACLYNHSSVADGNVTYSEGYCHMDNKDHFDGDPTNFSYPNLKEIHMNDFLLKVVGDITSFDSESQHTMNQNFDYDTKKDNTKGYKGPYDLTIELAETDPPNGLDIYEARHGGELSEECQDPETAAAGEDTTDDELLKYIHDDEYEVFDLRIIHRKNRTGFEENKELPIVLNTIIAGRYYITEYLGSAAFSRVVQAHDLQTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPTDERHILRLYDYFYHQEHLFLVTELLRANLYEFQKFNQESGGEAYFTLNRLQIITRQCLEALQYLHNLGIVHCDLKPENILIKSYKRCEIKVIDLGSSCFQTDHLCLYVQSRSYRAPEVMLGLQYDEKIDMWSLGCILAELCSGEVLFPNDAVVMILARMIGMLGPIDLDMLAKGEETHKYFTKEYDIYHVNEETNQLEYIIPEESSLEQHLQVTDTMFIDFVKCLLSINPKRRPTARQALKHPWLSNIYKS* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1337 686 ProSiteProfiles Protein kinase domain profile. 378 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1337 686 Pfam Protein kinase domain 380 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1337 686 Gene3D Phosphorylase Kinase; domain 1 373 459 - -
Lan9g1337 686 SMART serkin_6 378 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1337 686 PANTHER HYPOTHETICAL SER-THR PROTEIN KINASE-RELATED 8 684 - -
Lan9g1337 686 PANTHER DUAL SPECIFICITY PROTEIN KINASE 8 684 - -
Lan9g1337 686 Gene3D Transferase(Phosphotransferase) domain 1 432 680 - -
Lan9g1337 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Lan9g1337 686 CDD PKc_DYRK_like 378 680 - -
Lan9g1337 686 SUPERFAMILY Protein kinase-like (PK-like) 367 684 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1337 Lan-Chr9 20551686 20555982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1337 375 685 MAP Kinase Gene Family AT5G19010 31.118 9.81e-34 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Lan9g1337 Pkinase 3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1337 - - gmx:100783988 1097.03