Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1336 ATGATGGTCACTAAACCACCCTCCTCCGCCGTCACCCTCACCCTCACCGTCGCCGCCGTCGTCATCATTTTCTCTTTACTAGTGCCATTTTGTCATGCTTTCGGCTCCGGCACCACTCTCGCCGTCACCGACGGCTCCGCCACCGTGTGCGGCATTGTTGCGTCACACCCAATCCAACGCATTGAGTGCTACCGCCGCGGCCACGTCATCGCCGTCGTCCCCAAGGTCTCATTTTCTGTCATCTCCGGCGGAAGAAACTACTTCTGCGGCCTCAGGACCGGTAACTACAGCTTACTCTGCTGGGACACTGTCTCTTCCAATGTTACCTTTGAAAGGAGAAGACTTTACAACAATGGCACTGTTCTATTCGAGAATCTCGCCGTTGGTGACACCCAAGTTTGCGCTACAGTTGTTGGTGCCGGAATGGCGTCGTGTTGGAGAACCAATAGTGCGTTTGAATTGCCATCTGGGTATGATCAATTCGCTTCTATTTCATCTGGGTCGGGTTTTTCTTGCGGAATTGCGAAGAACGGTTCGTGGGTTCGGTGTTGGGGTAATGGGTCTATTGCTAGAAAGATAGAGAGTGAGTTTGGGAACATGTCTATGCTGAGTATTGTAGCTGGTGAATCACATGTTTGCGGGTTGAATTCAAATGGGTTTTTGGTATGTAGAGGGAGTAATAGTTTTGGTCAAATTGATATTCCGAAAGTAGGGTCCTTTGAGTATTCTGGGTTAGCACTTGGAGCTGAACATAGTTGTGCTATTAGGAGATTGAATGGTTCTGTTGTTTGTTGGGGTGGTAGGGGATTGTTCTCTGTTAATGTTACTCAAGGTGTTTCTTTTGAGACCATTGTTTCTGGCTCCAATTTTACTTGTGGATTGACAACAAGGAACTTTTCTGTTATGTGTTGGGGTCCTGGTTGGTCTAATAGTGATGGTTCTAGTTCTAGTCCTAGGTTTGAGCTTCCCTTGTCTCCTATTCTTCCAGGGCCTTGCGTTCAATCTTCTTGTAGTAAGTGTGGCGTGTATCCTGAGTCTCAAATTTTGTGTTCCGGAAATGGTAACATTTGCAAGCCACAGCCTTGTTCGCCTCAAATGTCAGTTCCGTTGGCACCACCACCGCCCTTACCACCATTGGCGCAGCCACCATCCATGCCTCCTTCCCCTTCGTTGTCGAAGGAATTGACAACAGGCTTATTGGTATTTGCCATTGTTGGATCAGTAGGAACTGCTGCAGGCATTTGCACCATAATTTATTGCTTGTGGACTGGTGTTTGTTTGGGGAAGAAGAAAGTCCATAATTCTGTGCAGCCAACAATTACTAGAGGTGGCAGTTCAAATGGTGATGATAATAGCCCGCCTTCGAGATCATCCACCATCATCCGTCAGGGCTCGAGAATAATGCGGCGTCAGAGGAGCGGAACATCGTCAACAAAACATACAGACAGGGCGGAGGAGTTCAACCTGGCTGAGCTTGCTTCGGCCACCAACAATTTCTCACTTGAGAACAAGATTGGTGCTGGAAGCTATGGCGTTGTTTATAGAGGCAAACTCACTGATGGTCGCGAGGTGGCCATCAAGAGGGGTGACACTGGTACCAAGATGAAGAAGTTTCAAGAGAAAGAGAGTGCATTTGAGTCAGAATTGGCGTTCATGTCCCGTCTACACCACAAGCATTTGGTTAGGCTAATTGGGTACTGTGAAGAGAAAGATGAAAGACTCTTGGTGTATGAATATATGACAAATGGGGCATTATATGATCATTTGCATGACAAAAACAATGTGGACAAGAATAGTAGTCTCTTGAATTCTTGGAGAATGAGGATCAAAATCGCGCTTGATGCTTCGCGAGGAATTGAATATCTTCATAATTATGCAGTTCCATCTATAATTCACAGAGATATCAAGTCCTCTAATATTCTGATCGACGCAAATTGGACGGCAAGAGTATCTGATTTTGGATTGTCATTGATGAGTCCAGATTCTGGCCATGATTACCAGCCTACGAAGGCAGCTGGAACGGTTGGGTATATTGATCCTGAGTATTATGGTCTAAATGTTTTGACAGCAAAGAGTGATGTCTATGGGCTTGGAGTGGTACTACTAGAACTCTTAACAGGAAAGAGAGCTATATTCAGGCATGGTGAGAATGGAGGCACCCCCGTGAGTGTTGTAAGCTATGCTGTGCCTGCAATCATGGGAGGAGACTTGTCGCAGATTCTGGACCCGAGGGTTGAACCACCAGAGTTGAATGAAACAGACGCGGTGGAGCTGGTGGCCTATACAGCTATGCATTGTGTAAATTTGGAAGGGAAAGATAGACCAACAATGGCTGACATTGTGGCCAATTTGGAGCGTGCTTTGACTCTGTGTGCTACTAGTCATGGCAGCATTTCCAGCGGTACAATCTCTATTGTATCAGACTGA 2427 0.466 MMVTKPPSSAVTLTLTVAAVVIIFSLLVPFCHAFGSGTTLAVTDGSATVCGIVASHPIQRIECYRRGHVIAVVPKVSFSVISGGRNYFCGLRTGNYSLLCWDTVSSNVTFERRRLYNNGTVLFENLAVGDTQVCATVVGAGMASCWRTNSAFELPSGYDQFASISSGSGFSCGIAKNGSWVRCWGNGSIARKIESEFGNMSMLSIVAGESHVCGLNSNGFLVCRGSNSFGQIDIPKVGSFEYSGLALGAEHSCAIRRLNGSVVCWGGRGLFSVNVTQGVSFETIVSGSNFTCGLTTRNFSVMCWGPGWSNSDGSSSSPRFELPLSPILPGPCVQSSCSKCGVYPESQILCSGNGNICKPQPCSPQMSVPLAPPPPLPPLAQPPSMPPSPSLSKELTTGLLVFAIVGSVGTAAGICTIIYCLWTGVCLGKKKVHNSVQPTITRGGSSNGDDNSPPSRSSTIIRQGSRIMRRQRSGTSSTKHTDRAEEFNLAELASATNNFSLENKIGAGSYGVVYRGKLTDGREVAIKRGDTGTKMKKFQEKESAFESELAFMSRLHHKHLVRLIGYCEEKDERLLVYEYMTNGALYDHLHDKNNVDKNSSLLNSWRMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILIDANWTARVSDFGLSLMSPDSGHDYQPTKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFRHGENGGTPVSVVSYAVPAIMGGDLSQILDPRVEPPELNETDAVELVAYTAMHCVNLEGKDRPTMADIVANLERALTLCATSHGSISSGTISIVSD* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1336 808 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 806 - -
Lan9g1336 808 Pfam Protein kinase domain 500 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1336 808 Gene3D - 31 199 IPR009091 -
Lan9g1336 808 Gene3D - 200 369 IPR009091 -
Lan9g1336 808 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Lan9g1336 808 MobiDBLite consensus disorder prediction 438 483 - -
Lan9g1336 808 SMART serkin_6 499 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1336 808 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 806 IPR044815 GO:0004674
Lan9g1336 808 MobiDBLite consensus disorder prediction 368 391 - -
Lan9g1336 808 ProSiteProfiles Protein kinase domain profile. 499 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1336 808 MobiDBLite consensus disorder prediction 438 474 - -
Lan9g1336 808 Gene3D Transferase(Phosphotransferase) domain 1 580 796 - -
Lan9g1336 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lan9g1336 808 Gene3D Phosphorylase Kinase; domain 1 460 579 - -
Lan9g1336 808 SUPERFAMILY Protein kinase-like (PK-like) 478 784 IPR011009 -
Lan9g1336 808 MobiDBLite consensus disorder prediction 368 389 - -
Lan9g1336 808 SUPERFAMILY RCC1/BLIP-II 28 267 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1336 Lan-Chr9 20544886 20547584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1336 8 808 Receptor kinase-like Gene Family AT3G55950 61.463 0.0 890
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lan9g1336 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1336 - - gmx:100798905 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1141 2 22653710 22656564 Lan9g1336 9 20544886 20547584 LSH
Lan11g0242 11 1544910 1547972 Lan9g1336 9 20544886 20547584 LSH
Lan15g0114 15 815038 817688 Lan9g1336 9 20544886 20547584 PCT
Lan9g1336 9 20544886 20547584 Lan15g0114 15 815038 817688 PCT