Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1321 ATGCCTTCTTGTGCAACAACAACCTTGGTCTCAAAATTCAGTGTCTTCCCAGACCAAAAATCCAACCTTCCAGACCTTAAACTCTCTGTTTCAGACCTTCCTATGCTTTCTTGCCACTACATCCAAAAAGGTTGTCTTTTCACTAAACCTTCTATTCCAACCCATACTCTTATCCCACTCCTCAAATCAGCACTCTCTCGCACTCTTTCCCTTTTTCCTCCACTCGCTGGTCGTTTAACCACCGACTCTGATGGTTACGTTTACATCACTTGTAACGATGCTGGCGTTGATTTCCTTCACGCCAATGCTTCCTCTTACAAAATCTCTGACCTTTTGTCTTCACTTGATATCTCTCCTTCTTTCAAAGAATTCTTCACCTTCGATAGCAAGGTTAGCTATAGTGGCCATTCCTCTCCTATAGTTGCTGTTCAGGTTACTGAACTCGCTGACGGTGTTTTCATTGGCTGCGCCGCTAATCATGCTGTTACTGACGGAACTTCTTTCTGGAATTTCTTTAATGTCTTTGCTCAATTATGCAGAGGAGGTTGTAAGGGACTTCATATGGTTCCCGATTTCACACGTGACTCCGTTCTGATTTCGAACTGTGTTCTTCGTTTGCCACAAGGTGGTCCTAAAGTAACGTTCGATGCTGACGCGCCATTACGCGAACGAATCTTCAGCTTCAGCCGTGAATCGATTCAGGAACTGAAAGCCAGAGTCAATAACAGAAAATTGACAGAGGATAAAGCTGTTGAGTTGATGATGAAAAACAGCAACGATTATTATCAGAAAGAGAACGGCAAGGTTGCTACGATTTTCGAGAACTGGTTCAAAACTGAAGTTAATTCTAAACCGCAACTCGCAACTGAAACGGTTGAGATTTCGTCGTTTCAGTCTCTCTGCGCTTTGCTGTGGCGTGCGGTTACACGCGCGAGGAAGTTACAAGCGTCGAAAATGACGACGTTTAGAATGGCGGTTAACTGTCGCCACCGTATGAAACCAAAATTGGAAAGTTACTACTTCGGTAACGCGATTCAGAGCGTGCCAACTTACGCTTCTGCAGGGGAAGTGTTGTCTATGGATCTACGGTGGTGCGCGGAGCAGCTGAACAAAAACGTGAGGGAACACGATGATTCTATGGTGAGGAAGTTCATAGAGGATTGGGAGAATAATCCAAGGGTGTTCCCGTTGGGAAACCCTGATGGTGCATCAATCACCATTGGATCTTCTCCAAGATTCCCAATGTATGATAATGATTTCGGTTGGGGAAGACCTTTGGCGGTGAGGAGTGGAAAGGCGAATAAATTTGACGGTAAGATCTCTGCTTTTCCTGGGAGAGATGGAAGCGGAGCCGTTGATTTGGAAGTTGTTTTGGCGCCCGAAACTATGGCGGGGCTTGAGTGTGATGCGGAGTTTATGCTTTACGCTACGACTCAATTATAA 1443 0.4518 MPSCATTTLVSKFSVFPDQKSNLPDLKLSVSDLPMLSCHYIQKGCLFTKPSIPTHTLIPLLKSALSRTLSLFPPLAGRLTTDSDGYVYITCNDAGVDFLHANASSYKISDLLSSLDISPSFKEFFTFDSKVSYSGHSSPIVAVQVTELADGVFIGCAANHAVTDGTSFWNFFNVFAQLCRGGCKGLHMVPDFTRDSVLISNCVLRLPQGGPKVTFDADAPLRERIFSFSRESIQELKARVNNRKLTEDKAVELMMKNSNDYYQKENGKVATIFENWFKTEVNSKPQLATETVEISSFQSLCALLWRAVTRARKLQASKMTTFRMAVNCRHRMKPKLESYYFGNAIQSVPTYASAGEVLSMDLRWCAEQLNKNVREHDDSMVRKFIEDWENNPRVFPLGNPDGASITIGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGRDGSGAVDLEVVLAPETMAGLECDAEFMLYATTQL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1321 480 Pfam Transferase family 8 473 - -
Lan9g1321 480 Gene3D - 7 203 IPR023213 -
Lan9g1321 480 Gene3D - 220 472 IPR023213 -
Lan9g1321 480 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 474 - -
Lan9g1321 480 SUPERFAMILY CoA-dependent acyltransferases 41 188 - -
Lan9g1321 480 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 7 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1321 Lan-Chr9 20470635 20472486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1321 24 467 Monolignol Biosynthesis Gene Families AT5G48930 28.261 8.46e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1321 - - vun:114195488 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1131 2 22567071 22568850 Lan9g1321 9 20470635 20472486 LSH
Lan4g0151 4 2397248 2398836 Lan9g1321 9 20470635 20472486 PCT