Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1319 ATGGAATTGGAAACTTTGTATCCTCCTTGTTTTATGTCAAGTTCAAATTTGTTTGTGCAAGAGAGCAACAACAACATAGAATGGACTAGAGAAGAGAATAAGCAGTTTGAGAGTGCCATTGCCATATATGATAAGGACACTCCGGACCGATGGCTTAAGGTGGCAGCCATGATCCCTGGAAAGACTGTGTTTGATGTGATCAAGCAGTATAGGGAATTGGAAGAAGATGTGACTGAAATAGAAGCTGGTCGGGTTCCGATTCCGGGCTATATTGCCTCTTCTTTTACCTTTGAGCTTGTTAGCAACCAGAATTATGATGGATGTAGAAAGAGGGCTGCAACTGTCAGGGGTTCTGATCAGGAGAGGAAGAAAGGGGTACCCTGGACCGAAGAGGAACACAGACGTTTTCTTATGGGACTTATGAAGTATGGTAAAGGGGATTGGAGAAATATTTCGCGCAATTTTGTGGTCACAAAGACTCCAACCCAAGTTGCTAGTCATGCTCAGAAGTATTACATAAGACAAAAGGATTCTGGAGTTAAAGATAAAAGAAGGCCTAGTATCCATGATATAACCACTATAAATCTTGCAGAAACTGTTACTTCAGATAAGAATAATCCCCTTTTATTCAATGAGTCTCCCATGCATGAACCACAACAGAAGCTGGGTACTAGCATGTCAAAAGTACAATTGGATTGGATTAATCACTACAATGATGGTTCACTCATGGTTTTCAACTCAAATTGTGATGACTTATTGAAAGTACAAGGGCAGGATCTCAATGACTGTGCATACCATGAGGCTTATGCCAAGCTACAAATTCCAAGTTTCAGAATGGCTTCTAGAGACTTCAATAAGGAAGCTGTTTTTAGTATTCATGCACTTTCATGTGAACTCTGA 900 0.4044 MELETLYPPCFMSSSNLFVQESNNNIEWTREENKQFESAIAIYDKDTPDRWLKVAAMIPGKTVFDVIKQYRELEEDVTEIEAGRVPIPGYIASSFTFELVSNQNYDGCRKRAATVRGSDQERKKGVPWTEEEHRRFLMGLMKYGKGDWRNISRNFVVTKTPTQVASHAQKYYIRQKDSGVKDKRRPSIHDITTINLAETVTSDKNNPLLFNESPMHEPQQKLGTSMSKVQLDWINHYNDGSLMVFNSNCDDLLKVQGQDLNDCAYHEAYAKLQIPSFRMASRDFNKEAVFSIHALSCEL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1319 299 Gene3D - 126 177 - -
Lan9g1319 299 SUPERFAMILY Homeodomain-like 27 80 IPR009057 -
Lan9g1319 299 ProSiteProfiles Myb-like domain profile. 20 74 IPR001005 -
Lan9g1319 299 Gene3D - 20 87 - -
Lan9g1319 299 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 3 260 - -
Lan9g1319 299 ProSiteProfiles SANT domain profile. 128 176 IPR017884 -
Lan9g1319 299 Coils Coil 19 39 - -
Lan9g1319 299 Pfam Myb-like DNA-binding domain 127 171 IPR001005 -
Lan9g1319 299 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 123 175 IPR006447 GO:0003677
Lan9g1319 299 CDD SANT 27 73 IPR001005 -
Lan9g1319 299 SUPERFAMILY Homeodomain-like 122 177 IPR009057 -
Lan9g1319 299 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 260 IPR043363 -
Lan9g1319 299 ProSiteProfiles Myb-like domain profile. 120 172 IPR001005 -
Lan9g1319 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 120 176 IPR017930 -
Lan9g1319 299 CDD SANT 127 171 IPR001005 -
Lan9g1319 299 SMART sant 24 76 IPR001005 -
Lan9g1319 299 SMART sant 124 174 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1319 Lan-Chr9 20433278 20435142 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan9g1319 Myb_DNA-binding 3.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1319 - - gmx:778039 479.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1125 2 22520806 22523534 Lan9g1319 9 20433278 20435142 LSH
Lan4g0155 4 2505871 2508199 Lan9g1319 9 20433278 20435142 PCT
Lan9g1319 9 20433278 20435142 Lan4g0155 4 2505871 2508199 PCT