Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1317 ATGACTGAAGAAGACCGAACCTACGCCGTACCAACCGCCCCCAATGGCGTTGCCGCCGCCGCTGAATTTGAACACGACGGAGGCGATGATGTTGATATGAAAGTGGCGGGAAAAGTGAAGGGACCATGGTCTCCGGAGGAAGACGCGGTTCTCAGCCGATTGGTGGCGCAGTTCGGAGCGAGGAATTGGACCATGATCGCACGGGGAGTTCCTGGTCGTTCCGGCAAGTCGTGCCGGCTCCGGTGGTGTAATCAGTTAGACCCTTGCGTTAAACGCAAGCCTTTCACTGAGGAAGAGGACAGCCTTATACTTTCAGCCCATGCAATCCATGGAAACAAATGGGCAGCAATTGCAAGGCTTCTTCCAGGTAGAACAGATAATGCTATCAAGAATCACTGGAATTCTACTCTAAAGCGCAGGCATGTGGAATTAGGAACGCATGTCCGAAAACATGCTGATGTGATGGCAGATGGTAGCTTTGAGAAAACAAAGGCATCTTCTGAAGAAACCATGTCAGTTGGGGATATAAATTCATTGAATCCTCCAGAAGTCAGAAATGTTTATATGGATAATGAAATTAAACATAATGAAGACAACCCTCCAAAAAGAGATGGCGCTGAGGTTGAGGGACATCCTACGCTTTATCGACCAGCATCACGTATTAGTGCATTTAGTTTTTATAATCCTCCAGGCAGGCCAGCTACTGGACCATGTTCAAAGATGTTCCCATTGCAGTCCCCTTTGATCCAAGGCGTAGGAGCCTGTAAGTTATTTGACGGTACTGGATGTGAGCCCATGGTTCCATCGCAATGTGGCCATGGCTGCTGTGAAGTCGACTTGAGGGGAAGCAATTCTCAGGGTTCATTATTAGGTCCTGAATTTGTTGACTATTTGGAATCTCCATCTTTCACAAGTCATGAATTGATTTCAGTAGTTACAGACTTAAACAATATAGCTTGGATCAAGAGTGGCCTTGAGAGTTATGGTGCTGGCAGAGTAACCGGGAATACTGCTACCCAAGGGGCTGCCACTTCCTCAGAAACAGGCTTCTTAGGACAAGGTCTGAAGAATGATTATATGCAATACGAGGAGGGACCTGACAAGTTTTTGGGTGGGATGCAAGAAGTGTTATCAACAAAGATGCCTAGGCAGCATTTTGCAATGCCTGCAGAAGTTTGA 1179 0.4707 MTEEDRTYAVPTAPNGVAAAAEFEHDGGDDVDMKVAGKVKGPWSPEEDAVLSRLVAQFGARNWTMIARGVPGRSGKSCRLRWCNQLDPCVKRKPFTEEEDSLILSAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLKRRHVELGTHVRKHADVMADGSFEKTKASSEETMSVGDINSLNPPEVRNVYMDNEIKHNEDNPPKRDGAEVEGHPTLYRPASRISAFSFYNPPGRPATGPCSKMFPLQSPLIQGVGACKLFDGTGCEPMVPSQCGHGCCEVDLRGSNSQGSLLGPEFVDYLESPSFTSHELISVVTDLNNIAWIKSGLESYGAGRVTGNTATQGAATSSETGFLGQGLKNDYMQYEEGPDKFLGGMQEVLSTKMPRQHFAMPAEV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1317 392 MobiDBLite consensus disorder prediction 165 179 - -
Lan9g1317 392 SMART sant 39 88 IPR001005 -
Lan9g1317 392 SMART sant 91 139 IPR001005 -
Lan9g1317 392 ProSiteProfiles Myb-like domain profile. 87 137 IPR001005 -
Lan9g1317 392 CDD SANT 42 84 IPR001005 -
Lan9g1317 392 Gene3D - 94 140 - -
Lan9g1317 392 PANTHER MYB PROTEIN-RELATED 28 328 - -
Lan9g1317 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 86 IPR017930 -
Lan9g1317 392 PANTHER MYB TRANSCRIPTION FACTOR-LIKE PROTEIN 28 328 - -
Lan9g1317 392 Gene3D - 39 91 - -
Lan9g1317 392 SUPERFAMILY Homeodomain-like 37 133 IPR009057 -
Lan9g1317 392 Pfam Myb-like DNA-binding domain 40 86 IPR001005 -
Lan9g1317 392 Pfam Myb-like DNA-binding domain 92 136 IPR001005 -
Lan9g1317 392 ProSiteProfiles Myb-like domain profile. 40 86 IPR001005 -
Lan9g1317 392 CDD SANT 94 137 IPR001005 -
Lan9g1317 392 MobiDBLite consensus disorder prediction 162 181 - -
Lan9g1317 392 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 141 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1317 Lan-Chr9 20424355 20427739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1317 35 386 MYB Transcription Factor Family AT3G55730 45.405 8.70e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan9g1317 Myb_DNA-binding 3.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1317 K09422 - gmx:100781228 557.37