Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1308 ATGGCTTCTTCTGATGTTAATCACCTTTCTCATCCATGTATATACGGCGGCGGTAGGGATTTTTCTTCTTCACACTCAGAGAGAAAGTTTGGTTTCATGAAATGGCTTAGTAAGCTTTTCAAAGGTGGGTCCAATAGAGGAAGGGTTGGTCGTCATCATCTACCTGAGCCTGCAGAAGAAAACATGAGTTGGCGTGCTCCATCTAGAGCCTCGGATGATCGTGCTAGATCTCTGAAAGAAAAAGAGCTAGGCCATGCAATGGAACTTTCTCCAGGAGAAGATTTAAAGAGACCAAATGCCCATCAAGGATATGATTGGGGGATAGATACTGATGAAGATTACTCAAAGGGACTAGAGGATAGCTTGGACTCTTCTACATACCCTCCATATGCTCCTGCACCATATTATCCAAGGGATTATAGAATATGTGGCGGCTGCAATCAGGAGATACTGTACGGAAATTGTTTGGGCTGCATGGATTCTTATTTTCATCCAGATTGCTTTCGCTGTCACTCTTGTTGTTACCCGATCACTGAGCGCGAGTTTTCTTTATCAGGGAAGCATCCATATCATAAGGACTGTTTTAAGGAGTTGACACACCCAAAATGTGAAGTTTGCTTCCAATTTATTCCTGTCAATTCTGCTGGTTTGATTGAGTATAGGTGCCACCCTTTTTGGTCCCAAAAGTATTGTCCATCACACGAATATGATAATACAGCTCGCTGCGGCAGTTGTGAAAGATTGGAGCCTCGGAATATAAAATACTATAGACTGGAAGACGGGCGTAGTTTGTGCTTAGAGTGCATGGAATCTGCTATAATGGACACTGGTGATTGTCAACCTCTTTACCATTCTATCAGAGATTATTATGAAGGAATGCAAATGAGAATAGATCAACAAGTTCCCATGCTTCTGGTTGAAAGAGAAGCACTTAATGAAGCTATTGTTGGGGAGAAGAATGGTTTCCATCACTTGCCCGAAACAAGGGGCTTATGCCTTTCAGAAGAGCAAACTGTCACAAGTATACAAAGAAGGCCGAGAATCGGAGGCCATCGACTAATCGGGATAAGAACTCAACCTCACAAGCTGATTAGAAGAAGTGAAGTTACAGCCATTCTTGTTCTATATGGTCTTCCAAGGTTACTCACAGGTGCTATCCTTGCCCATGAGTTGATGCATGCTTGGTTACGCCTTAAAGGTTACCGCAACCTTAATCCTGAAGTAGAAGAAGGGATTTGTCAGGTTCTTTCATACATGTGGCTTGAGTCAGAAGTAATGCCAAACTTTCAAAACATGCCATCAACAGCTTCTTCTTCTTCCTCGTCCTCTTCTTCAAAGAAAGGTGCAAAGTCCCACGTCGAAAATAAACTTGGCGAATTTTTCATGAACCAGATTGTGAATGATTCTTCACCAGCTTATGGTGGCGGGTTTAGAGCTGCTAATGAAGCTGTTAATAAATATGGCTTACGAAGTACTCTCGACCATATTCGTTTGACTGGTTTTTTTCCTATGTAG 1515 0.4231 MASSDVNHLSHPCIYGGGRDFSSSHSERKFGFMKWLSKLFKGGSNRGRVGRHHLPEPAEENMSWRAPSRASDDRARSLKEKELGHAMELSPGEDLKRPNAHQGYDWGIDTDEDYSKGLEDSLDSSTYPPYAPAPYYPRDYRICGGCNQEILYGNCLGCMDSYFHPDCFRCHSCCYPITEREFSLSGKHPYHKDCFKELTHPKCEVCFQFIPVNSAGLIEYRCHPFWSQKYCPSHEYDNTARCGSCERLEPRNIKYYRLEDGRSLCLECMESAIMDTGDCQPLYHSIRDYYEGMQMRIDQQVPMLLVEREALNEAIVGEKNGFHHLPETRGLCLSEEQTVTSIQRRPRIGGHRLIGIRTQPHKLIRRSEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYRNLNPEVEEGICQVLSYMWLESEVMPNFQNMPSTASSSSSSSSSKKGAKSHVENKLGEFFMNQIVNDSSPAYGGGFRAANEAVNKYGLRSTLDHIRLTGFFPM* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1308 504 PANTHER TRANSCRIPTION FACTOR INTERACTOR AND REGULATOR LIM FAMILY-RELATED 22 504 - -
Lan9g1308 504 SMART lim_4 142 194 IPR001781 -
Lan9g1308 504 CDD LIM_DA1 143 195 - -
Lan9g1308 504 Pfam Protein DA1 292 499 IPR022087 -
Lan9g1308 504 MobiDBLite consensus disorder prediction 83 102 - -
Lan9g1308 504 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 135 168 - -
Lan9g1308 504 Pfam LIM domain 143 196 IPR001781 -
Lan9g1308 504 ProSiteProfiles LIM domain profile. 141 201 IPR001781 -
Lan9g1308 504 PANTHER PROTEIN DA1-RELATED 2 22 504 IPR045218 -
Lan9g1308 504 Gene3D Cysteine Rich Protein 132 202 - -
Lan9g1308 504 MobiDBLite consensus disorder prediction 46 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1308 Lan-Chr9 20354722 20358739 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g1308 DA1-like 9.5e-98 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1308 - - gmx:100784976 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0267 11 1740505 1745352 Lan9g1308 9 20354722 20358739 LSH