Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1303 ATGGCTGGGATTTGTTGTGGTGTTGTTGAAGGAGAAACCTCAACTCCAATTGCTTCTTCCTCGCTCCGACGCCGGAGTTCCGATCTGTTCCCTTTGAAATACATCGCCGACATGGCAGTTCCGTCATCCGATGGTAGTAGCTGGAAACGCCAGAAGCTCGATTCACACCCACAGTCACGTGAATGCGAAAACACTGTCCAAAATTGTGAATCAAATCTTACTATAGATAAGAACGAAGAGCAAAACAAGGAATCTAAGGGATACGATGAAGTTGTTATTGTTTCGGAAGTTCCTACGTTAGATTCTACGGAGACGAAGTTAGGATACGAGGTTGAGGTAGAAGAGTGTCCAAAGTATGGAGTCACATCGGTTTGTGGTAGAAGAAGGGATATGGAAGACGCTGTTTCAGTGTATCCATCCTTCTGTTCAAAAAACAGCAATACTGAAAATCAAAATCAAAATCAAAATCAAATTCAAGATCAGAAGAGGTTTCATTTCATCGGTGTTTATGACGGTCATGGGTGCTCTCACGTAGCGACCATGTGCAAAGAGAGGCTACATGGGATTGTGAAGGAAGAGATTGAAAAAATACAAGAGAATTTGGATTGGAAATCCACCATGGAACAGTGCTTCGATCTCATGGACAAGGAAGTGGAGCGGAGGACCCACACAAAAGACACCCCCAGTTGCAGGTGCGAGCTCCACACTCCCCACTCTGACGCTGTCGGATCCACCGCCGTCACCGCCGTTCTCACGCCAGAGAAGATAGTCGTCGCAAACTGCGGCGACTCACGCGCCGTTCTATGCCGTAACGGCGTTGCCATCCCCCTTTCTTCCGATCACAAGCCCGACCGACCCGACGAGTTGATTCGTGTCGAAGCCGCGGGAGGGCGCGTGATATATTGGGATGGTGCTAGAGTGCTTGGTGTGCTTGCTATGTCCAGAGCAATAGGGGACAATTATCTAAAACCGTATGTAATTTCGGAACCTGAGGTAACGGTAACGGAGAGGAGTGAAGAGGATGAGTGTTTGATACTAGCGAGTGATGGGCTTTGGGATGTGGTGTCAAACGACACCGCATGTGGGGTGGTGCGGATGTGTCTTAAAGCGCAGCAGAAGGCCGTGTCGCCGCCGGGGTCTCCGGGAAGTTACATGGCGGCGGAGGGATCTGATAAGGCCTGCTCCGATGCATCAATTTTGTTGACCAAGTTGGCGTTGGCGAGGCACAGTTCAGACAATGTGAGTGTGGTGGTAGTTGATTTGAGGAGAGATCATTAG 1278 0.4922 MAGICCGVVEGETSTPIASSSLRRRSSDLFPLKYIADMAVPSSDGSSWKRQKLDSHPQSRECENTVQNCESNLTIDKNEEQNKESKGYDEVVIVSEVPTLDSTETKLGYEVEVEECPKYGVTSVCGRRRDMEDAVSVYPSFCSKNSNTENQNQNQNQIQDQKRFHFIGVYDGHGCSHVATMCKERLHGIVKEEIEKIQENLDWKSTMEQCFDLMDKEVERRTHTKDTPSCRCELHTPHSDAVGSTAVTAVLTPEKIVVANCGDSRAVLCRNGVAIPLSSDHKPDRPDELIRVEAAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSEEDECLILASDGLWDVVSNDTACGVVRMCLKAQQKAVSPPGSPGSYMAAEGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRDH* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1303 425 MobiDBLite consensus disorder prediction 41 65 - -
Lan9g1303 425 PANTHER ALPHABET, ISOFORM E-RELATED 34 424 - -
Lan9g1303 425 ProSiteProfiles PPM-type phosphatase domain profile. 118 421 IPR001932 -
Lan9g1303 425 CDD PP2Cc 118 369 IPR001932 -
Lan9g1303 425 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 34 424 - -
Lan9g1303 425 Pfam Protein phosphatase 2C 119 413 IPR001932 -
Lan9g1303 425 SMART PP2C_4 104 419 IPR001932 -
Lan9g1303 425 ProSitePatterns PPM-type phosphatase domain signature. 166 174 IPR000222 GO:0043169
Lan9g1303 425 Gene3D - 108 425 IPR036457 -
Lan9g1303 425 SUPERFAMILY PP2C-like 114 422 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1303 Lan-Chr9 20314559 20316356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1303 117 423 PP2C-type Phosphatase Gene Family AT1G07430 61.702 5.89e-138 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1303 K14497 - gmx:100776356 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0273 11 1787657 1789728 Lan9g1303 9 20314559 20316356 LSH
Lan4g0178 4 2901578 2903503 Lan9g1303 9 20314559 20316356 PCT
Lan9g1303 9 20314559 20316356 Lan4g0178 4 2901578 2903503 PCT