Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1301 ATGTCGAATCATTGGTGGGCTGGGAATGTGGCTAGGAGGCAAACAGAGCCGAACTCTTCTTCTTCTTCACCACCTCTTCAGCTGAGAAACCATTCATCAGTTGAAGAAGAACAAGTTGATCAGATTAGAGTGAAGCCCAGAAAAGAACAAGAATTGATGGACAAGAACATAGGCAACAACAATAATCTACCAACTCCAACCGACAGCAACAACAATGCCACCGAGGACGATGAGAACAACGACCGTGACGACAACAACCATGGTACACCGGATCAAGGCGGCGGAAGTGGCCGCCGCCCCCGAGGCAGGCCACCGGGGTCAAAAAACAAACCCAAACCTCCGGTTGTTATAACCAAGGAGATCCCCAACGCGCTTCGTAGCCACGTGTTGGAGATCAGCAGCGGCAATGATATTGCCGAGTGCATTGCCACCTTCGCTAACCGTCGGCACCGTGGGGTTTCGGTGCTGAGCGGTAGCGGGGTTGTAATTAATGTTTCCCTCAGGCAACAAGCTGCACCTGGTGGGGTTGTAACCCTTCATGGAAGGTTCGAGATTTTGTCACTGTCCGGTGCTTTTTTGCCTGCACCCTCGCCACCGGGTGCTACGGGGTTAACCGTCTACTTAGCCGGTGGTCAGGGCCAGGTTGTTGGCGGAACCGTGGGTGGTCCGTTGGTGGCTGCTGGACCTGTTATGGTAATAGCTGCAACTTTTGCTAATGCTACTTATGAGAGGTTGCCGCTTGAGGATGAACCAGGTGAAGAGGACATGCAATTGCAGCAGCAGAAACAAGAAGTGAATGAAGGTGGTGATGGAACTCCTGTGTCTCAGGGTTTAGGTGAAAACCAACAACAGGTTCCAATGCCAGTGTATAATTTGAATCCAAGTTTGGTGCCACCAAATGGTCAAATTCCTCATGATGTGTTTTGGGGTGCTGCACCTCGCCCTCCACCACCACCTCCACCTTCTTATTGA 972 0.5144 MSNHWWAGNVARRQTEPNSSSSSPPLQLRNHSSVEEEQVDQIRVKPRKEQELMDKNIGNNNNLPTPTDSNNNATEDDENNDRDDNNHGTPDQGGGSGRRPRGRPPGSKNKPKPPVVITKEIPNALRSHVLEISSGNDIAECIATFANRRHRGVSVLSGSGVVINVSLRQQAAPGGVVTLHGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGTVGGPLVAAGPVMVIAATFANATYERLPLEDEPGEEDMQLQQQKQEVNEGGDGTPVSQGLGENQQQVPMPVYNLNPSLVPPNGQIPHDVFWGAAPRPPPPPPPSY* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1301 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 58 315 IPR014476 GO:0003680
Lan9g1301 323 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 249 - -
Lan9g1301 323 MobiDBLite consensus disorder prediction 55 73 - -
Lan9g1301 323 MobiDBLite consensus disorder prediction 1 116 - -
Lan9g1301 323 MobiDBLite consensus disorder prediction 250 323 - -
Lan9g1301 323 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 58 315 - -
Lan9g1301 323 MobiDBLite consensus disorder prediction 258 298 - -
Lan9g1301 323 MobiDBLite consensus disorder prediction 1 32 - -
Lan9g1301 323 Pfam Plants and Prokaryotes Conserved (PCC) domain 126 238 IPR005175 -
Lan9g1301 323 ProSiteProfiles PPC domain profile profile. 122 259 IPR005175 -
Lan9g1301 323 MobiDBLite consensus disorder prediction 33 54 - -
Lan9g1301 323 CDD DUF296 126 209 IPR005175 -
Lan9g1301 323 Gene3D - 125 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1301 Lan-Chr9 20293847 20295610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1301 98 316 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.818 4.42e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1301 - - qsu:112039774 315.849