Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1300 ATGACAGGGTTTGGCTCATCATGTGGAGCATGCAAGTTCCTAAGGAGAAAATGCACCAGTGATTGTGTATTTTCTCCTCACTTCTCCTATGACGAGGCTACAACCCATTTTTCAGCAGTGCATAAGGTTTATGGTGCTAGTAACGTATCCAGGCTATTGTCACATCTTCCTATCCAGTTTAGAAGTGATGCAGCCATCACTATATCTTACCAAGCAATGGCTCGCATGCAGGATCCTATATATGGTTGTGTTGCTCATATTTATGCATTGCAGCAACAGGTTGCCAACTTGCAAGAGGAGATAAATATTCTTGCAAGTAATCTAACAATGGAAAATTCCACAGTTGGTGTTCTCAATTGTGGCAGTGACCAAACACCAGTGAACTCAAACAATGAAATACACTATATTTTGCAGAATGATGCTAATAGGGAACAATATTATCAAAACCAACTGTCTAATCTTCTTTCTAATCATGAAGGAAGCAGTGCTACAAGCTACCACCAAAGTTTTGACTCAATGATGAATATAGAGCTTTCTAATGCACATGGACTGGAAGATTCTTCTCTATTTGGTGATTCCAACTCCAATCCGTTAGAGAAGTTCCTATCTGGAATTGACCAAGAGGTTTTCATGAATCATCCATGGTTCAAGCATAATGCAGAAATGAACTAG 672 0.3943 MTGFGSSCGACKFLRRKCTSDCVFSPHFSYDEATTHFSAVHKVYGASNVSRLLSHLPIQFRSDAAITISYQAMARMQDPIYGCVAHIYALQQQVANLQEEINILASNLTMENSTVGVLNCGSDQTPVNSNNEIHYILQNDANREQYYQNQLSNLLSNHEGSSATSYHQSFDSMMNIELSNAHGLEDSSLFGDSNSNPLEKFLSGIDQEVFMNHPWFKHNAEMN* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1300 223 Coils Coil 87 107 - -
Lan9g1300 223 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Lan9g1300 223 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 221 - -
Lan9g1300 223 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 221 - -
Lan9g1300 223 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1300 Lan-Chr9 20287942 20289046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1300 1 108 AS2 family AT5G06080 68.519 3.26e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan9g1300 LOB 7.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1300 K13945 - gmx:100787638 290.041