Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1298 ATGGCTTCAAACTCCCTCAATAATAACAAAGAAAGTTCTTCCTCTTGGACATCCATGCAAAACAAGCAATTTGAAAAAGCACTAGCTTTGTATGACAAAGATACCCCAGATCGATGGAAAAATATAGCCAAAGTAGTTGGTGATAAATCAGCTGAGGAAGTGAAGAAACACTATGAAATCCTTTTGGAGGACCTTAGGCGTATAGAATCTGGAAGTGTTCCAATTCCCAAATATAAGTCCACAGCAAGCAGCAATAATATTATTGATGAAGAACATAGGCTTCTCAAGTACCTTAATCAGAAGCTTTGA 309 0.3722 MASNSLNNNKESSSSWTSMQNKQFEKALALYDKDTPDRWKNIAKVVGDKSAEEVKKHYEILLEDLRRIESGSVPIPKYKSTASSNNIIDEEHRLLKYLNQKL* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1298 102 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 82 IPR044636 GO:0003700
Lan9g1298 102 CDD SANT 15 62 IPR001005 -
Lan9g1298 102 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Lan9g1298 102 Gene3D - 7 75 - -
Lan9g1298 102 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Lan9g1298 102 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Lan9g1298 102 SMART sant 12 64 IPR001005 -
Lan9g1298 102 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Lan9g1298 102 PANTHER PROTEIN RADIALIS-LIKE 3 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1298 Lan-Chr9 20276320 20277360 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan9g1298 Myb_DNA-binding 1.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1298 - - pvu:PHAVU_008G192200g 149.828