Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1290 ATGGCAATTGGGTTCATGGAGGTGCAACTTGTCAAAGCAAAGGGCCTGTATGACACTGATAAGTTTGGTAGAATGGACCCTTATGTCCTTATACAATACAAAGGCCAAGAGAAAAGGAGCAGTGTTGCCAAGGGACAAGGCAAAAATCCAGTTTGGAATGAGAAGTTTCTGTTCAAAGTAGAATACCCTGGATTAGATAATCGACACAAGCTCATCCTGAAAATCATGGACAAAGATAGATTATCTGCAGATGACTCTGTTGGACAATCCATAATCTATGTAGGGGATTTATTGGCTCAAGGGGTAGACAATGGAGGAGCTATGCTACAGACTCTAAAGTATAGAGTGGTTCGTGAAAACCAATCTTATTGTGGAGAAGTTGATGTTGGTATAACCTTCACCCGAAAGGTGGAAGAGGAATTTATTGGAGAAGACATTGGAGGATGGAAGGAAAGTGGCTACTATCAGCCACAGATCAGCAAGTGA 486 0.4177 MAIGFMEVQLVKAKGLYDTDKFGRMDPYVLIQYKGQEKRSSVAKGQGKNPVWNEKFLFKVEYPGLDNRHKLILKIMDKDRLSADDSVGQSIIYVGDLLAQGVDNGGAMLQTLKYRVVRENQSYCGEVDVGITFTRKVEEEFIGEDIGGWKESGYYQPQISK* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1290 161 SMART C2_3c 5 106 IPR000008 -
Lan9g1290 161 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 136 IPR035892 -
Lan9g1290 161 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 153 - -
Lan9g1290 161 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Lan9g1290 161 PANTHER C2 DOMAIN-CONTAINING 1 153 - -
Lan9g1290 161 Pfam C2 domain 6 101 IPR000008 -
Lan9g1290 161 Gene3D C2 domain 2 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1290 Lan-Chr9 20060637 20062550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1290 3 105 C2H2 Transcription Factor Family AT4G21160 31.068 8.86e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1290 - - gmx:100791344 261.151