Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1289 ATGACAATTGGGTTCATGGAAGTGTTGCTGGTGAAAGCAAAGGGGCTTCATGAAACTGATATCTTTGCTCGTATGGATCCATATGTTCTGTTACAATACAAAGGCCAAGAGCGCAAAAGCAGTGTACTTCATGAGGCTGGAAAAAATCCTGTATGGAATGAGAAGATTGTATTCAGAGTGGAATACCCTGGCTCAAGTGATCCATACAAGCTCTACCTTAAAATCATGGACAGAGACGTATTTTCTGCAGACGATTTTGTCGGCCAGGCCACAATATATGTGAAGGATTTATTGGCAGAAGGAGCAGAGAAAGGATCAGCTAAACTTCATCCTTGCAAGTATAGTGTGGTTGGAGCTAACCAATCTTATTGTGGTGAAATTGAAATTGGTATAACTTTCACCAGAAAGGAAGAGGAATATGGTGACCATGATTTTGGGGGATGGAAGGAAAGTGAGTATTAG 462 0.4113 MTIGFMEVLLVKAKGLHETDIFARMDPYVLLQYKGQERKSSVLHEAGKNPVWNEKIVFRVEYPGSSDPYKLYLKIMDRDVFSADDFVGQATIYVKDLLAEGAEKGSAKLHPCKYSVVGANQSYCGEIEIGITFTRKEEEYGDHDFGGWKESEY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1289 153 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Lan9g1289 153 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 152 - -
Lan9g1289 153 Pfam C2 domain 7 104 IPR000008 -
Lan9g1289 153 Gene3D C2 domain 3 135 IPR035892 -
Lan9g1289 153 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 137 IPR035892 -
Lan9g1289 153 PANTHER C2 DOMAIN-CONTAINING 1 152 - -
Lan9g1289 153 SMART C2_3c 5 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1289 Lan-Chr9 20057167 20059756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1289 3 109 C2H2 Transcription Factor Family AT4G05330 33.645 2.00e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1289 - - gmx:100500493 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0289 11 1887186 1888789 Lan9g1289 9 20057167 20059756 LSH