Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1269 ATGCACACCACTTTTTTCACCATTCTCATTACTCTCTCTTCTCTTCTCTCTCTCACAAACACCATGGAGAAGTTCAAGTTCGAATCTTTTCTCTTTTTCCTATCTGGGTTCCTCTCCCTCACTGTTTTAGTTTTCTGCCAAAACGACGACGCTTCAGTAATGCTATCTCTCAAGAAAAACCTCAACCCACCCGAATCTCTCGGGTGGACCGACCCGAACCCATGCAAGTGGAGCCACGTCACTTGCTCCGGCGACAACCGTGTAACCCGGATCCAAATCGGGCGCATGAACCTCCAAGGCACTCTTCCACCCACTCTCCAAAACTTGACCCAGTTGCAGCACTTGGAGCTCCAATACAACAACATTTCGGGACCCATACCCGACTTAAACGGGTTAACCTTGCTCCAAGTCTTCATGGCCAGCAATAACCGCTTCACTTCATTCCCAACTACCTTCTTCAATGGTATGTCTCAGCTTCAAGTAGTGGAAATCGATAACAACCCTTTTGAGGAGTGGGAGATACCTTTGAGTCTTCAAAATGCTTCTTCACTTCAGAATTTCTCTGCTAACTCTGCTAGTGTTAGAGGCAAGTTACATGATTTCTTTGGCTCTGATGTTTTCCCGGCTTTGACCCATTTGCATTTAGCGTTTAACAAAATTGAAGGAACTTTGCCTTTGAGTTTTTCTGGGTCACAGATTGAGACCCTTTGGTTGAATGGACAAAAGGGTGATGGTGATGGTGATGGTGATGGTGATGCTAAACTTGGTGGCACTGTTGAGGTTTTGCAAAACATGACTTTTTTGACTGAGGTTTGGTTGCACTCAAATGGTTTTACTGGCCCTTTACCAGATTTTTCAGGGTTGAAAAGCTTAAAAGTTTTGAGCTTGAGGGATAATAGTTTCACCGGTCCTGTTCCGAGTTCGTTGGTGAGTCTTAAGTCTTTGAAAGTTGTTAACTTGACTAATAACTTTCTTCAGGGACCAATACCAGTGTTTGGTCCTGATGTTGAGGTTGATATGAGTAAGGATTCGAATAGATTTTGCTTGGCTGGTCCTGGTGATTGTGATCCCAAGGTGCAGGTTTTACTTTCTATTATTAGACTTTTCGGTTATCCTCAAAGGTTTGCTGAGAATTGGAAGGGGAATGATCCTTGTAATGATTGGCTTGGGATTACTTGTAGTAATGGGAACATTACTGTTGTCAATTTTCAGAAGATGGGGCTTACTGGTGTCATATCACCGGAATTTTCCAAGCTCAAATCACTGCAAAGACTTGTGCTTGCTGATAACAATCTCACTGGCTTAATTCCTGAGGAACTTACTAGTTTGCCTGTGCTCACTCAATTGAATGTCGCAAACAATCAGCTTTTCGGGAAAAAACCAAGTTTTAGGAGTAATGTGATTGTTGACAGCAGTGGCAACAAGGATATAGGGAAGGATAAAAGCAGTTTGTCCCCTCAGGGTCCAGTGTCTCCAACAGTTCCAAGTGCAAGGGGAGAAAATAATGGGAGTTCTGAAAATGGTGCCAAAAAGTCTTCTTCCCATGTAGGAGTGATTGTGTTTGCCACGGTTGGGTCTGTATTTGTGGTTTGCTTGATTGGTTTCTTAGTTTTCTGCTTGCTTAGGATGAAGCAGAAGCGCTTAAGCAGGGTCCAAAGCCCAAATACACTAGTTATTCACCCTCGCCATTCTGGTTCGGATAATGAGAGTGTGAAGATTACGGTTGCAGGTTCAAGTGTGAGTGTTGGTGGTGTTAGTGAAACTCAAACCATGGGTGGCAGTGAGGCAGGAGATATGCAAATGGTTGAAGCCGGAAATATGGTCATTTCCATACAAGTCCTGAGGAATGTCACTGACAATTTCAGTGAGAAGAACATATTAGGACAAGGAGGTTTTGGAACTGTTTATAAAGGTGAGCTGCATGATGGTACAAGAATTGCAGTGAAAAGAATGGAGTGTGGCATTATAACCGGCAAGGGTGCTACAGAATTCAAGTCTGAAATAGCTGTTTTGACGAAGGTTCGTCATCGACATCTTGTTGCTCTTCTTGGCTATTGCTTGGATGGGAATGAGAAGCTTCTTGTGTATGAGTACATGCCTCAGGGAACACTAAGCAGACATCTTTTTAACTGGTCAGAAGAAGGGCTGAAACCATTGGAATGGAATAGAAGATTGACCATTGCCTTGGATGTAGCAAGGGGTGTTGAGTACCTCCATGGCTTGGCCCATCAAAGCTTCATACACAGAGACTTGAAACCTTCAAATATTCTCCTTGGAGATGATATGAGGGCAAAAGTTGCAGATTTTGGTCTGGTGCGCCTTGCTCCTGAAGGCAAAGCTTCCATAGAAACAAGAATTGCAGGAACCTTTGGATATTTGGCACCAGAATATGCAGTTACTGGTCGTGTGACAACTAAAGTTGATGTGTTCAGCTTTGGTGTAATTTTGATGGAAGTGATAACAGGAAGAAAAGCACTTGATGAGACCCAACCAGAGGATAGCATGCACCTTGTAACATGGTTCCGTCGAATGTACATAAACAAGGACTCGTTCCACAAGGCCATTGATCCCACACTCGATCTGAACGAGGAAACACTTGCTAGCGTTCACACCGTAGCTGAGTTAGCTGGTCATTGTTGTGCTAGGGAACCATATCAAAGGCCTGACATGGGTCATGCTGTTAATGTGCTTTCTTCTCTTGTAGAACTTTGGAAGCCATCTGATCTGAGTTCTGAAGATATGTACGGTATTGACCTTGACATGTCTTTACCACAAGCACTTAAGAAGTGGCAAGCTTATGAAGGTGGAAGTCACATGGAGTCTTCTTCATCTTCACTTCTTCCAAGCTTGGATAACACACAGACAAGTATACCTACGCGCCCATATGGATTTGCCGATTCTTTCACGTCTGCAGATGGTAGATAA 2925 0.4359 MHTTFFTILITLSSLLSLTNTMEKFKFESFLFFLSGFLSLTVLVFCQNDDASVMLSLKKNLNPPESLGWTDPNPCKWSHVTCSGDNRVTRIQIGRMNLQGTLPPTLQNLTQLQHLELQYNNISGPIPDLNGLTLLQVFMASNNRFTSFPTTFFNGMSQLQVVEIDNNPFEEWEIPLSLQNASSLQNFSANSASVRGKLHDFFGSDVFPALTHLHLAFNKIEGTLPLSFSGSQIETLWLNGQKGDGDGDGDGDAKLGGTVEVLQNMTFLTEVWLHSNGFTGPLPDFSGLKSLKVLSLRDNSFTGPVPSSLVSLKSLKVVNLTNNFLQGPIPVFGPDVEVDMSKDSNRFCLAGPGDCDPKVQVLLSIIRLFGYPQRFAENWKGNDPCNDWLGITCSNGNITVVNFQKMGLTGVISPEFSKLKSLQRLVLADNNLTGLIPEELTSLPVLTQLNVANNQLFGKKPSFRSNVIVDSSGNKDIGKDKSSLSPQGPVSPTVPSARGENNGSSENGAKKSSSHVGVIVFATVGSVFVVCLIGFLVFCLLRMKQKRLSRVQSPNTLVIHPRHSGSDNESVKITVAGSSVSVGGVSETQTMGGSEAGDMQMVEAGNMVISIQVLRNVTDNFSEKNILGQGGFGTVYKGELHDGTRIAVKRMECGIITGKGATEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSRHLFNWSEEGLKPLEWNRRLTIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMEVITGRKALDETQPEDSMHLVTWFRRMYINKDSFHKAIDPTLDLNEETLASVHTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPSDLSSEDMYGIDLDMSLPQALKKWQAYEGGSHMESSSSSLLPSLDNTQTSIPTRPYGFADSFTSADGR* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1269 974 MobiDBLite consensus disorder prediction 940 963 - -
Lan9g1269 974 SUPERFAMILY L domain-like 64 463 - -
Lan9g1269 974 PANTHER RECEPTOR PROTEIN KINASE TMK1 36 974 - -
Lan9g1269 974 Gene3D Ribonuclease Inhibitor 356 481 IPR032675 -
Lan9g1269 974 SMART serkin_6 621 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1269 974 MobiDBLite consensus disorder prediction 474 511 - -
Lan9g1269 974 ProSitePatterns Protein kinases ATP-binding region signature. 627 649 IPR017441 GO:0005524
Lan9g1269 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 746 758 IPR008271 GO:0004672|GO:0006468
Lan9g1269 974 Gene3D Phosphorylase Kinase; domain 1 582 698 - -
Lan9g1269 974 SUPERFAMILY Protein kinase-like (PK-like) 598 905 IPR011009 -
Lan9g1269 974 CDD STKc_IRAK 627 900 - -
Lan9g1269 974 ProSiteProfiles Protein kinase domain profile. 621 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1269 974 Pfam Leucine rich repeat 416 456 IPR001611 GO:0005515
Lan9g1269 974 Pfam Protein kinase domain 622 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1269 974 MobiDBLite consensus disorder prediction 940 974 - -
Lan9g1269 974 ProSiteProfiles Leucine-rich repeat profile. 111 133 IPR001611 GO:0005515
Lan9g1269 974 Pfam Leucine rich repeat N-terminal domain 48 83 IPR013210 -
Lan9g1269 974 Pfam Leucine rich repeat N-terminal domain 359 394 IPR013210 -
Lan9g1269 974 Gene3D Ribonuclease Inhibitor 46 355 IPR032675 -
Lan9g1269 974 PANTHER OSJNBA0070M12.3 PROTEIN 36 974 - -
Lan9g1269 974 Gene3D Transferase(Phosphotransferase) domain 1 699 914 - -
Lan9g1269 974 SMART LRR_typ_2 443 465 IPR003591 -
Lan9g1269 974 SMART LRR_typ_2 288 312 IPR003591 -
Lan9g1269 974 SMART LRR_typ_2 207 230 IPR003591 -
Lan9g1269 974 SMART LRR_typ_2 419 442 IPR003591 -
Lan9g1269 974 SMART LRR_typ_2 109 131 IPR003591 -
Lan9g1269 974 SMART LRR_typ_2 132 155 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1269 Lan-Chr9 19939752 19943576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1269 97 903 Receptor kinase-like Gene Family AT5G07280 30.600 4.41e-80 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Lan9g1269 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1269 K00924 - aprc:113846741 1539.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0322 11 2098341 2102606 Lan9g1269 9 19939752 19943576 LSH