Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1264 ATGTTGAAAATTTCTTTCACCATTATTGTTCACTTCACACTCTTCTTCGTTTTCTTCATCGTTAATGTTATAACCATAACCACCACCACCACCACCGAATTTGACTTTGGATCATTAACATTAAGCAGTCTCAAACTTCTCGGCGATGCCCACTTGAAAAACGGCACCGTTAGCCTCACGCGCGACCTCGCAGTACCCAATTCCGGCGCCGGTAGAGTCCTGTATTCCCGTCCGATCAGATTCCGGCAATCCGGCTCCCATTCTCCGACGAGCTTCAACACCTTCTTCTCCTTCTCGATCATGAAACTCAACCCCTCCTCCATCGGCGGCGGCCTCGCCTTCCTCCTCTCGCCGGACGACGATTCCATCGGAGATGCCGGCGGATTCCTCGGCCTCGGCGGTGGCGGAAGTTTCGTTGCGGTGGAATTTGATACTCGTATGGACGTGGAATTCAAAGACATTAATGGAAACCATGTTGGGGTGAACCTTAACACCATGGTTTCAACGCAAGTTTGTGACTTGGGTGAAATTGGAATCGATCTCAAAAGTGGGGATTCGGTGAACGCGTGGATCGAGTTTGATGGATCCACAAAGGGATTGGTCGTGTGGGTTTCATATTCGAATCTAAAACCGAAAGAACCGATTTTGACTTTGAATCTCGACGTGGACCAGTTTTTCAATGATTTTATGTATGTGGGGTTTTCTGGTTCTACTCAAGGAAGCACAGAAGTTCATAGTGTTGAGTGGTGGAGCTTTAGTTCTTCTTTTAATTCGACAGCATCCTCGGCGGCACCTCCGCCTCCGGTGGTTAGTTTTATGAACCCAACCGCCAATCCGATTATGCCGCCGCCTTCTTTGGCGCCTTCGGCTTCATCGAATGCTCAACAAAAGGAGAGAAAGTCGACTTGCCACAGTGGATTATGCAAACAAGGTTTAGGTGCAGTTGCTGGTGTTGTAGCTGCTGGGGCTTTTGTTTTGGCTTTATTTGCTGGTGCATTGATTTGGGTTTATTCTAAAAAGTTCAAGCACGTGAAGAAGTTGGGTTCATTAGGATCAGAGATAATCAAGATACCAAAACAGTTTAGCTATATGGAGCTTAAAGTAGCTACTGAGTGCTTCAATGCTAATAGGATAATTGGTCATGGTGCATTTGGGACTGTGTATAAGGGTATTTTGCCTGAAAATGGGGACATTGTTGCGGTGAAGAGATGCAGCCATAGCAGTCAGGGTAAGAATGAGTTTTTGTCTGAGTTATCCATAATTGGGACCCTTAGACATCGGAATCTTGTTCGCCTTCAAGGTTGGTGCCACGAGAAAGGTGAGATTTTATTGGTGTATGACTTGATGCCTAATGGGAGTTTAGATAAGGCTTTGTTTGAAGCTAGAACCCCACTGCCTTGGCCTCATAGGTGCAAGATTTTGTTAGGCGTTGCATCTGCGTTGGCCTACTTGCATCAGGAATGTGAGAATCAGGTAATTCACAGGGACATTAAGACTAGTAACATAATGTTAGATGAAGGGTTCAATGCTAAGTTGGGCGATTTTGGTTTGGCTAGGCAAACCGAGCATGACAAATCGCCTGATGCCACGGTTGCTGCCGGAACAATGGGGTACCTGGCACCTGAGTATCTACTTACGGGTAAAGCTACAGAGAAAACCGATGTGTTTAGCTATGGTGCCGTTGTTCTTGAGGTGGCCAGTGGGAGAAGACCTATTGAGAAGGATGCCACCGGTTTTCGCAAAGCCGGGGTTTGTTCCAATTTGGTAGAGTGGGTTTGGAGTTTGCACCATGAAGGTAGATTGCTAACAGCGGCCGATCAAATGCTAGAGGGGGAGTTCAATGAAGAGCAAATGAGGAGGTTTCTCTTGGTTGGACTAGCTTGCTCACACCCTGATCCATTGGCTAGACCCACTATGAGGAGTGTGGTTCAGATGCTGGTCGGCGAGGCTGAAGTGCCTATTGTTCAAAGAACCAAGCCATCTACAAGTTTTACTACTTCTCACTCCCAACTCTTACTGAGTTTGCAAGATAGTGTATCTGACTGTGATGGTATAATCACCATCTGCACCTCATCAGAGAATAGCTTCAATGGTCGAGATATAGTATGA 2109 0.4651 MLKISFTIIVHFTLFFVFFIVNVITITTTTTTEFDFGSLTLSSLKLLGDAHLKNGTVSLTRDLAVPNSGAGRVLYSRPIRFRQSGSHSPTSFNTFFSFSIMKLNPSSIGGGLAFLLSPDDDSIGDAGGFLGLGGGGSFVAVEFDTRMDVEFKDINGNHVGVNLNTMVSTQVCDLGEIGIDLKSGDSVNAWIEFDGSTKGLVVWVSYSNLKPKEPILTLNLDVDQFFNDFMYVGFSGSTQGSTEVHSVEWWSFSSSFNSTASSAAPPPPVVSFMNPTANPIMPPPSLAPSASSNAQQKERKSTCHSGLCKQGLGAVAGVVAAGAFVLALFAGALIWVYSKKFKHVKKLGSLGSEIIKIPKQFSYMELKVATECFNANRIIGHGAFGTVYKGILPENGDIVAVKRCSHSSQGKNEFLSELSIIGTLRHRNLVRLQGWCHEKGEILLVYDLMPNGSLDKALFEARTPLPWPHRCKILLGVASALAYLHQECENQVIHRDIKTSNIMLDEGFNAKLGDFGLARQTEHDKSPDATVAAGTMGYLAPEYLLTGKATEKTDVFSYGAVVLEVASGRRPIEKDATGFRKAGVCSNLVEWVWSLHHEGRLLTAADQMLEGEFNEEQMRRFLLVGLACSHPDPLARPTMRSVVQMLVGEAEVPIVQRTKPSTSFTTSHSQLLLSLQDSVSDCDGIITICTSSENSFNGRDIV* 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1264 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Lan9g1264 702 CDD lectin_legume_LecRK_Arcelin_ConA 48 250 IPR001220 GO:0030246
Lan9g1264 702 Pfam Protein kinase domain 374 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1264 702 Pfam Legume lectin domain 32 260 IPR001220 GO:0030246
Lan9g1264 702 Gene3D Phosphorylase Kinase; domain 1 337 448 - -
Lan9g1264 702 PANTHER - 25 695 - -
Lan9g1264 702 Gene3D Transferase(Phosphotransferase) domain 1 449 659 - -
Lan9g1264 702 ProSiteProfiles Protein kinase domain profile. 373 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1264 702 SUPERFAMILY Protein kinase-like (PK-like) 355 669 IPR011009 -
Lan9g1264 702 Gene3D - 30 266 - -
Lan9g1264 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 31 265 IPR013320 -
Lan9g1264 702 ProSitePatterns Legume lectins beta-chain signature. 139 145 IPR019825 -
Lan9g1264 702 SMART serkin_6 373 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1264 702 CDD STKc_IRAK 379 646 - -
Lan9g1264 702 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Lan9g1264 702 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.2 25 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1264 Lan-Chr9 19897465 19899968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1264 12 685 Receptor kinase-like Gene Family AT3G53380 69.565 0.0 918
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lan9g1264 Pkinase 2.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1264 - - lang:109356779 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0225 4 3704238 3706583 Lan9g1264 9 19897465 19899968 LSH
Lan2g1074 2 21997329 21999854 Lan9g1264 9 19897465 19899968 LSH
Lan4g0225 4 3704238 3706583 Lan9g1264 9 19897465 19899968 PCT
Lan2g1074 2 21997329 21999854 Lan9g1264 9 19897465 19899968 PCT
Lan9g1264 9 19897465 19899968 Lan2g1074 2 21997329 21999854 PCT
Lan9g1264 9 19897465 19899968 Lan9g1264 9 19897465 19899968 PCT
Lan9g1264 9 19897465 19899968 Lan4g0225 4 3704238 3706583 PCT