Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1243 ATGCAAGATCCATCATCAAACCCTAATTCCAATCCTCTCAAAGCCAATGCCGCTTCACAATTACCGCCACCTCCGCCGTCCACGGCAGCGACAACTTCATCATCGTCTTCATTTTTTATTCGCTCCGCCGGAAGTGGTGGGTCCCACCACCGTAGGGCTCACTCGGAGGTGAGCTTTCGGTTGCCGGACGACATGATGGATCTGTCGCCGTCCGATCCGTTCAACGGCGGTTCGTCGGCGGCGAGCTTCGAGGAGATCGGATCGGAAGATGATCTGTTCTCGACGTACATTGACGTGGACAAACTCGGAGGTTCGAACGGGGCGGGTGAATTCTGTAACGGAACGGATCCGGGTGAGAATGGTGAACCGTCGGAGAAGAATCCGAATGTGAGGCCGATGCATCGGCATAGTAGTTCGGTGGATGGTTCAACGTCGTCGTTTGGAGAGATTATGGATGCGAAGAAAGCTATGTCTCCTGATAAGTTAGCTGAGCTTTGGACAATTGATCCCAAACGCGCCAAGAGGATACTTGCGAATCGGCAATCTGCTGCTCGTTCAAAAGAGAGAAAGGCTCGCTATATACAAGAACTTGAGCGCAAAGTTCAGACCCTTCAGACTGAAGCCACAACTCTTTCTGCTCAACTGACACTGTACCAGAGGGACACAACAGGTCTGAGTACTGAAAATACAGAGCTTAAGTTCCGTCTTCAAGCCATGGAGCAACAGGCACATCTTCGTGATGCTCTTAACGAAGCACTGAAGAAGGAAGTTGAGAGGCTTAAAGTCGCTACTGGGGAGATGATGAGCCCTACTGACTCATTCAATCTTGGAATGCACCAGATGCAATTTACAGGATCAAATTTCTTTCCAATCCCACCACAATCAGGTCCTTCTGGACAGCAAAACATGCAATTGCCACCCTTTGGTCATGCCCCATCTAGCATACCAACTCATCAACTGCAACAAACAAATTCTCATTCGCTCTCAGAAAGCTTGCAAAATGACCAACTCGGTCGTTTTCAAGGACTTGACATTAGTAGCAAAGGATCAGCTCTCGTAAAGTCTGAAAGCTCCTCACTTTCTGCTAGTGAGAGTAGCACTACATTTTGA 1110 0.4901 MQDPSSNPNSNPLKANAASQLPPPPPSTAATTSSSSSFFIRSAGSGGSHHRRAHSEVSFRLPDDMMDLSPSDPFNGGSSAASFEEIGSEDDLFSTYIDVDKLGGSNGAGEFCNGTDPGENGEPSEKNPNVRPMHRHSSSVDGSTSSFGEIMDAKKAMSPDKLAELWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKFRLQAMEQQAHLRDALNEALKKEVERLKVATGEMMSPTDSFNLGMHQMQFTGSNFFPIPPQSGPSGQQNMQLPPFGHAPSSIPTHQLQQTNSHSLSESLQNDQLGRFQGLDISSKGSALVKSESSSLSASESSTTF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1243 369 Coils Coil 246 266 - -
Lan9g1243 369 MobiDBLite consensus disorder prediction 350 369 - -
Lan9g1243 369 Pfam bZIP transcription factor 171 226 IPR004827 GO:0003700|GO:0006355
Lan9g1243 369 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 2 366 - -
Lan9g1243 369 PANTHER ATBZIP TRANSCRIPTION FACTOR 2 366 - -
Lan9g1243 369 CDD bZIP_plant_RF2 172 221 IPR044759 GO:0003700|GO:0006355
Lan9g1243 369 SMART brlzneu 167 231 IPR004827 GO:0003700|GO:0006355
Lan9g1243 369 Coils Coil 187 214 - -
Lan9g1243 369 MobiDBLite consensus disorder prediction 287 330 - -
Lan9g1243 369 SUPERFAMILY Leucine zipper domain 171 222 IPR046347 GO:0003700|GO:0006355
Lan9g1243 369 Gene3D - 170 222 - -
Lan9g1243 369 MobiDBLite consensus disorder prediction 108 145 - -
Lan9g1243 369 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 169 232 IPR004827 GO:0003700|GO:0006355
Lan9g1243 369 MobiDBLite consensus disorder prediction 1 85 - -
Lan9g1243 369 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1243 Lan-Chr9 19715464 19718141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1243 1 369 bZIP Transcription Factor Family AT2G40620 51.843 1.01e-105 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lan9g1243 bZIP_1 5.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1243 - - vra:106763153 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1049 2 21734446 21737390 Lan9g1243 9 19715464 19718141 LSH
Lan2g1049 2 21734446 21737390 Lan9g1243 9 19715464 19718141 PCT
Lan16g0548 16 6379343 6383147 Lan9g1243 9 19715464 19718141 PCT
Lan9g1243 9 19715464 19718141 Lan2g1049 2 21734446 21737390 PCT
Lan9g1243 9 19715464 19718141 Lan16g0548 16 6379343 6383147 PCT