Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1241 ATGGGAAACAAGTTTAAACTTTCAGATATGATACCAAATGCTTGGTTTTACAAGCTCAAAGATATGAGTAAATCAAGGAAGAGAAATGGCTCTACTGTTATGAAGAACAAATCAACTTCACCAACAACATCCCAAAGGTCACTCCCAAAGTATTCATATTATGTCCAAACTGAACCAAGTAGAGGTGGTAAGTTATACAACACACCTATTCACACCAATGATTTGGCACCATTCAATGATTCACCAAGAAGGTCATCAAAGAGAAGGGCTAGGAGAAAAACCATTTACAAGCCTTCTCCGGTCGTGTCGTCTTCTTTCAAAGCCAGTTCCAGCTGTGATTCAAGAAATTGTTGGACTAAGTCATATCAAATTCAGTCTCCAGATTATGATGCATCTTCCTTTGAAAGTTCTTCTGAATCTGATATCCATGAATATGTTTATTCTGAGTCTGAGTGTGATAGATTTTCTGTTCCTGATTTGCTTAATGGAATAGACTCAAATTGCAGCTGCAGAGTTAGTTCTTCTACTAATGACATTATCATTGACATGAAAAATGAATGCTTCAGTGGGAATTCTGAAAAGCTAGATGGGTTTGGTACAATTTCACAGTTAGGCCTTGCTTCAATATTGACAAAGCCAGTGAAGTTTGATAATAAGGACTCTGAAGCTACTGAGTTTGATGTGCTGCATCTGGATCATTCTCTCCCTAACAAATTTACGAAAGCAGAAAGCGGTAGAACTCAGAGAAGGCGAAAAGGCAGTCACATAGCTCGAACGTCGTCTGCTAATTCTACGGGCGTAAAACTTAGAGTCAATTCTCCAAAACTAGCAAGCAAAAAAATGCAAGCCTATGCAAGAAAGAGTGTGTCATCCAATAGTCCTAGTAAAGCTTCAAGGAATACAAGCTTCCCAGATGGATATGCTGTTGTTCAGTCTTCATTTGATCCACAGAGTGATTTCAAGGAGTCAATGGTGGAGATGATTGTGGAGAACAATATCCGGGCATCGAAAGATTTGGAGGACTTACTTGCCTGCTATCTTACCCTAAATTCAAGTGAATATCATGATCTTATTGTTAAAGCATTTGAACAAATTTGGTTTGACATGGCTCAACTGAAAATTTAA 1125 0.3822 MGNKFKLSDMIPNAWFYKLKDMSKSRKRNGSTVMKNKSTSPTTSQRSLPKYSYYVQTEPSRGGKLYNTPIHTNDLAPFNDSPRRSSKRRARRKTIYKPSPVVSSSFKASSSCDSRNCWTKSYQIQSPDYDASSFESSSESDIHEYVYSESECDRFSVPDLLNGIDSNCSCRVSSSTNDIIIDMKNECFSGNSEKLDGFGTISQLGLASILTKPVKFDNKDSEATEFDVLHLDHSLPNKFTKAESGRTQRRRKGSHIARTSSANSTGVKLRVNSPKLASKKMQAYARKSVSSNSPSKASRNTSFPDGYAVVQSSFDPQSDFKESMVEMIVENNIRASKDLEDLLACYLTLNSSEYHDLIVKAFEQIWFDMAQLKI* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1241 374 MobiDBLite consensus disorder prediction 284 303 - -
Lan9g1241 374 MobiDBLite consensus disorder prediction 239 303 - -
Lan9g1241 374 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Lan9g1241 374 MobiDBLite consensus disorder prediction 26 95 - -
Lan9g1241 374 MobiDBLite consensus disorder prediction 32 54 - -
Lan9g1241 374 Pfam Transcriptional repressor, ovate 313 369 IPR006458 -
Lan9g1241 374 PANTHER TRANSCRIPTION REPRESSOR OFP1-LIKE 3 372 - -
Lan9g1241 374 MobiDBLite consensus disorder prediction 61 80 - -
Lan9g1241 374 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 372 IPR038933 GO:0045892
Lan9g1241 374 ProSiteProfiles OVATE domain profile. 309 368 IPR006458 -
Lan9g1241 374 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 308 369 IPR006458 -
Lan9g1241 374 MobiDBLite consensus disorder prediction 257 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1241 Lan-Chr9 19692924 19694455 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lan9g1241 Ovate 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1241 - - gmx:100780926 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1046 2 21712389 21714165 Lan9g1241 9 19692924 19694455 LSH
Lan2g1046 2 21712389 21714165 Lan9g1241 9 19692924 19694455 PCT
Lan9g1241 9 19692924 19694455 Lan2g1046 2 21712389 21714165 PCT
Lan9g1241 9 19692924 19694455 Lan9g1241 9 19692924 19694455 PCT