Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1236 ATGGCACTTTTTCCTCGATTTTCTTCTTCAGCAGCCATGAATGTTATGTTAGCTTTGTTCTTTCTTCTTCTTACTCGGAGTTCTGCTGCTCAACTCTCTGAGAACTTCTATTCAAATAAATGTCCTAAGGTTTTTAACGCTGTAAAATCTGTTGTTCATTCTGCTATCGCTAAAGAGCCTCGCATTGGTGCATCTCTTCTTCGACTCCACTTTCATGACTGTTTTGTCAATGGTTGTGATGGGTCAATACTACTTGATGACACATCCTCCTTCAGAGGAGAGAAAACTGCACCTCCCAACAACAATTCTGTGAGAGGTTTTGAAGTGATTGATGCTATAAAATCTAAGGTGGAGGAAACATGTCCCGGTGTGGTATCATGTGCTGATATTGTAGCCATTGCTGCTCGTGACTCTATAGCTATTCTGGGAGGACCTTATTGGAATGTAAAAGTTGGAAGAAGGGATTCTAAGACAGCTAGCTTTTCTGATGCAAGCAGTGGTGTGATTCCACCTCCTTTTTCTACCCTTAGCAACCTTATCTCAAGGTTTCAAGCACAAGGACTCTCTGTCAAGGACATGGTTGCCTTATCTGGAGCCCACACTATAGGAAAAGCAAGGTGTGCTAGTTACAGAGATAGAATATACAATGACACAAACATTGACAAATTATTTGCTAAGTCAAGGCAGAGGAATTGTCCTAGGAAAAGTAGTGGAACACCAAAAGACAACAATGTAGCAGTCCTAGATTTCAAAACTCCTACTCATTTTGACAACTCATACTACAAAAACCTCATCAACAAAAAAGGACTCCTTCATTCTGACCAACAACTCTTCAATGGAGGATCCACTGATTCATTGGTTAGAACTTATAGCAGCAATGAAAAGACCTTCAACTCTGATTTTGTTACTGCAATGATTAAGATGGGAAATATCAAACCTTTAACTGGTTCAAATGGACAGATTAGGAAGCATTGCAGGAGAGCAAATTAG 990 0.4 MALFPRFSSSAAMNVMLALFFLLLTRSSAAQLSENFYSNKCPKVFNAVKSVVHSAIAKEPRIGASLLRLHFHDCFVNGCDGSILLDDTSSFRGEKTAPPNNNSVRGFEVIDAIKSKVEETCPGVVSCADIVAIAARDSIAILGGPYWNVKVGRRDSKTASFSDASSGVIPPPFSTLSNLISRFQAQGLSVKDMVALSGAHTIGKARCASYRDRIYNDTNIDKLFAKSRQRNCPRKSSGTPKDNNVAVLDFKTPTHFDNSYYKNLINKKGLLHSDQQLFNGGSTDSLVRTYSSNEKTFNSDFVTAMIKMGNIKPLTGSNGQIRKHCRRAN* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1236 329 Gene3D Peroxidase, domain 2 170 308 - -
Lan9g1236 329 CDD secretory_peroxidase 31 327 IPR033905 GO:0004601|GO:0042744
Lan9g1236 329 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601
Lan9g1236 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Lan9g1236 329 PANTHER PEROXIDASE 15 328 - -
Lan9g1236 329 ProSiteProfiles Plant heme peroxidase family profile. 31 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 Pfam Peroxidase 48 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1236 329 Gene3D - 35 326 - -
Lan9g1236 329 PANTHER PEROXIDASE 72-RELATED 15 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1236 Lan-Chr9 19659135 19662593 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1236 1 329 Peroxidase AT5G58400 63.526 2.42e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1236 K00430 - gmx:100812478 504.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0532 16 6192486 6196673 Lan9g1236 9 19659135 19662593 PCT
Lan9g1236 9 19659135 19662593 Lan16g0532 16 6192486 6196673 PCT