Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1234 ATGTCTTCTTCTCATGTCCAATACTTGGTCGTGCTTGTTATGGTTCCTTTTGTAACATTATATGTTATCCCTACACATGCAAATTTGAGTTCTGAATATTATGACAAAGTTTGCCCTCAAGCATTGCCAACTATAAGGTCTATTGTTGAGAAAGCAATTATTAGTGAGCACCGTATAGGAGCATCTTTACTGCGTATGCACTTCCATGACTGCTTTGTTAATGGTTGTGATGCATCAGTTCTACTAGATGATACTCCTTTGTTTGTGGGCGAGAAAAGTGCACTACCAAATAGAAACTCATTGAGAGGGTTTGAAGTGGTTGATGAGATTAAAGAAGCTGTTGATAAAGTTTGCAAATGCCCTGTAGTATCATGTGCTGATATCTTGGCTATTGCAGCTCGTGATTCTGTAGCCATTTTAGGAGGACAAAAATATTGGTACGAAGTGTTATTAGGCAGAAGAGATACAAGAATTGCATCAAGAGATGCTGCAAATACCAATATCCCAGCCCCATTTTTCAGCTTCCCACAGTTACTTTCTACTTTCCACTCTCATGGGCTGAACCTTAAAGACCTTGTAGTTCTCTCTGGTAGCCACACCATTGGTTTTGCCCAATGCAGTGCTTTCAACAACAGGATCTTCAATGACACCAACATAGACCATAAATTTGCAGCCACTTTGTGTAAAATATGCTCTCAAATTGGTGGTAATAATAATTTAGCATCACTTGATTCAACTCCTGCAAGATTTGATACCACATACTATACTTCTTTATTGTACAAAAAGGGTCTTCTTCATTCTGATCAAGAGCTCTTCAAAGATGATGGTAGTGAAAGTGACAAATTGGTGCAGTTTTATAGCAAAAACTCTTATGCTTTTGCTAAAGACTTTGGAGCTTCCATGATTAAGATGGGTAACATGAAGCCTCTCACTGGAAATCAGGGTGAGATTAGGTGTGATTGTAGAAAAGTCAACTACGGACTAAAACTTCACATTACAAGCCTGGGTCACAAAATTATGAAGAAGGGTGAAGATGGAGAAACTTTTTCTTTCAAAGTTATGATAATTTTTATATTTCTCTATATGTTATAA 1092 0.3745 MSSSHVQYLVVLVMVPFVTLYVIPTHANLSSEYYDKVCPQALPTIRSIVEKAIISEHRIGASLLRMHFHDCFVNGCDASVLLDDTPLFVGEKSALPNRNSLRGFEVVDEIKEAVDKVCKCPVVSCADILAIAARDSVAILGGQKYWYEVLLGRRDTRIASRDAANTNIPAPFFSFPQLLSTFHSHGLNLKDLVVLSGSHTIGFAQCSAFNNRIFNDTNIDHKFAATLCKICSQIGGNNNLASLDSTPARFDTTYYTSLLYKKGLLHSDQELFKDDGSESDKLVQFYSKNSYAFAKDFGASMIKMGNMKPLTGNQGEIRCDCRKVNYGLKLHITSLGHKIMKKGEDGETFSFKVMIIFIFLYML* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1234 363 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Lan9g1234 363 PANTHER CATIONIC PEROXIDASE 10 325 - -
Lan9g1234 363 SUPERFAMILY Heme-dependent peroxidases 28 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 Pfam Peroxidase 46 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 ProSiteProfiles Plant heme peroxidase family profile. 28 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Lan9g1234 363 Gene3D - 33 325 - -
Lan9g1234 363 PANTHER PEROXIDASE 72-RELATED 10 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lan9g1234 363 Gene3D Peroxidase, domain 2 169 304 - -
Lan9g1234 363 CDD secretory_peroxidase 28 324 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1234 Lan-Chr9 19645154 19648139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1234 21 325 Peroxidase AT5G05340 53.247 3.60e-111 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1234 K00430 - gmx:100816580 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1041 2 21562733 21564435 Lan9g1234 9 19645154 19648139 LSH
Lan2g1042 2 21612633 21614221 Lan9g1234 9 19645154 19648139 LSH
Lan2g1041 2 21562733 21564435 Lan9g1234 9 19645154 19648139 PCT
Lan9g1234 9 19645154 19648139 Lan2g1042 2 21612633 21614221 PCT
Lan9g1234 9 19645154 19648139 Lan9g1234 9 19645154 19648139 PCT
Lan2g1042 2 21612633 21614221 Lan9g1234 9 19645154 19648139 PCT
Lan9g1234 9 19645154 19648139 Lan2g1041 2 21562733 21564435 PCT