Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1229 ATGGCTTCTTCTTCTGATACTTTGGACACTTGCGCAAACTCTTACAACAACTTCACCTTCTCAACACACCCTTTCATGACAACATCATTCTCTGATCTTTTAGCTTCTCCCATAGATGATGATAATAATAATAAGCATATTGGTTTATCAGATTGTGTAGCTGAGAGAACTGGTTCTGGTGTACCAAAATTCAAGTCTATACAACCTCCTTCACTCCCTCTCTCTCCTTCTTCTCTCTTTTCTCCTTCTTCTTACTTTGCTATCCCTCATGGTTTAAACCCTGCTCAGTTTCTTGATTCACCTGTTCTCTTAAACTCTTCTCACACTTTGCCATCTCCAACAACTGGAGCATTTGCTGATTGGAAGAACAATTCTGGGGGCAACCAACAAACGATCAAAGAAGAGAAAAACTTCTCCTTTCAAACTCAATCAGCACCTCCTCATTCATCTACAGCAACTTTTCAATCATCAAATGGCACAGTTCAAACTGAACAACCATGGAGTTATCAGGAAGCTACAAAACATGATAGCTTTTCTTCAGGGAGGAGTTTGAAGAAAACTGAAAACTCTTCTTTCATGCAGAGCTTTTCCCCTGAGATTTCTAGTGTCCAAACTAATAACCACAATTACCAACAACAACAACAAGTTCAGACCTTAAGTAGAAGGTCAGATGATGGTTACAATTGGAGGAAATATGGAGAGAAAAAAGTTAAAGGGAGTGAAAATCCAAGGAGTTATTACAAATGCACATACCCTAATTGCCCTACAAAGAAAAAAGTTGAGAGGTCTTTGGATGGACAAATTACTGAGATAGTTTACAAGGGTAGTCATAACCATCCCAAGCCTCAAAACACTAGGAGAAACTCATCATCTTCATCTTCTGTTTCAATTATTCCTTCAAATCCAACCAGCTTAGAAATCAAAGATCATTCATATGCCACACATGGCAGTGGACAAATGGATTCTATTGCCACCCTTGAGAATTCATCATTATCAATAGGCGATGATGAGTATGATGAAGATGAACCTGATTCAAAAAGATGGAAAATTGAAGGTGAAAATGAGTGTATATCAGCTCCTGGAAGTAGAACTGTGAGAGAACCAAGGATTGTTGTTCAGACAACTAGTGACATTGATATCTTATATGATGGGTATAGATGGAGGAAATATGGGCAGAAGGTAGTCAAAGGTAATCCAAATCCAAGGAGTTACTACAAATGCACACACCAAGGATGTCCAGTGAGGAAGCATGTAGAGAGAGCCTCACATGATCTTAGAGCAGTGATCACAACCTATGAAGGAAAGCACATCCATGATGTACCTGCAGCACATGGAAATGGCAACCATTCTGTCAATAGGTCAATACCAAACAATAACACTTCCAACCTCACCAATGCAGCCACTACTACCATAAGGCCCATGCCATTGAACCACCCCACTAACAACAATTCTCTTCAGAGTACTAGGCCACAAGCAACAGATCAAGGGCAATCACCCTTCATACTAGAGATGCTTCAGAGCTCAAGAAGTTTTGGATTATCAGGGTTTAGGAATCCTATGGGGTCTTACATGAATCAGCAACAACAACTATCTGATAATGTGTTTTCTTCAGGAACCAAGGAGGAGCCAAAAGATGACACGTTCCTTGATTCTTTGCTATGCTGA 1665 0.3988 MASSSDTLDTCANSYNNFTFSTHPFMTTSFSDLLASPIDDDNNNKHIGLSDCVAERTGSGVPKFKSIQPPSLPLSPSSLFSPSSYFAIPHGLNPAQFLDSPVLLNSSHTLPSPTTGAFADWKNNSGGNQQTIKEEKNFSFQTQSAPPHSSTATFQSSNGTVQTEQPWSYQEATKHDSFSSGRSLKKTENSSFMQSFSPEISSVQTNNHNYQQQQQVQTLSRRSDDGYNWRKYGEKKVKGSENPRSYYKCTYPNCPTKKKVERSLDGQITEIVYKGSHNHPKPQNTRRNSSSSSSVSIIPSNPTSLEIKDHSYATHGSGQMDSIATLENSSLSIGDDEYDEDEPDSKRWKIEGENECISAPGSRTVREPRIVVQTTSDIDILYDGYRWRKYGQKVVKGNPNPRSYYKCTHQGCPVRKHVERASHDLRAVITTYEGKHIHDVPAAHGNGNHSVNRSIPNNNTSNLTNAATTTIRPMPLNHPTNNNSLQSTRPQATDQGQSPFILEMLQSSRSFGLSGFRNPMGSYMNQQQQLSDNVFSSGTKEEPKDDTFLDSLLC* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1229 554 ProSiteProfiles WRKY domain profile. 376 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 MobiDBLite consensus disorder prediction 535 554 - -
Lan9g1229 554 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 Pfam WRKY DNA -binding domain 383 438 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 42 530 IPR044810 GO:0003700
Lan9g1229 554 MobiDBLite consensus disorder prediction 273 303 - -
Lan9g1229 554 SUPERFAMILY WRKY DNA-binding domain 373 441 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 MobiDBLite consensus disorder prediction 447 494 - -
Lan9g1229 554 Gene3D WRKY domain 207 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 SMART WRKY_cls 381 440 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 MobiDBLite consensus disorder prediction 138 193 - -
Lan9g1229 554 MobiDBLite consensus disorder prediction 278 303 - -
Lan9g1229 554 MobiDBLite consensus disorder prediction 439 494 - -
Lan9g1229 554 SUPERFAMILY WRKY DNA-binding domain 222 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 ProSiteProfiles WRKY domain profile. 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 Gene3D WRKY domain 368 434 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan9g1229 554 PANTHER WRKY TRANSCRIPTION FACTOR WRKY24-LIKE 42 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1229 Lan-Chr9 19574023 19576986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1229 61 553 WRKY Transcription Factor Family AT2G38470 45.611 3.83e-106 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan9g1229 WRKY 3.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1229 K13424 - gmx:100127393 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0064 4 841540 846019 Lan9g1229 9 19574023 19576986 LSH
Lan2g1031 2 21360251 21363912 Lan9g1229 9 19574023 19576986 LSH
Lan11g0370 11 2674289 2677742 Lan9g1229 9 19574023 19576986 LSH
Lan4g0064 4 841540 846019 Lan9g1229 9 19574023 19576986 PCT
Lan2g1031 2 21360251 21363912 Lan9g1229 9 19574023 19576986 PCT
Lan9g1229 9 19574023 19576986 Lan2g1031 2 21360251 21363912 PCT
Lan9g1229 9 19574023 19576986 Lan11g0370 11 2674289 2677742 PCT
Lan9g1229 9 19574023 19576986 Lan9g1229 9 19574023 19576986 PCT
Lan11g0370 11 2674289 2677742 Lan9g1229 9 19574023 19576986 PCT
Lan9g1229 9 19574023 19576986 Lan4g0064 4 841540 846019 PCT