Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1228 ATGGCTGGATCATCTGCATTGAACATGAGCATGTTTGGAAATTCTGCATTGGATAATAACATATATGTGTGTGAAATCAATCGCAGTAAGTTTCAACGTTCAAGTGGAATATTCTTCGGTGAAAACCCATTGAAATTCACGCTTCCAGTGATCGTTCTACAAACATGTTTAGTTGGATTGTTGACTACAATCTTGCAGCTGCTACTTATACCACATGGAGTTACTAATTTCCCTCCACGATTGCTGGCAGGCTTGATAATGGGACCATCAATACTTGGAGAAATTGATTTAGTTAGAAAATATCTTTTCCCACCAAGAACTTACTATATAAATGACACAATAGCCTTTTTCGGGAGCATGATGTATATGTTTGTAATTGGAATCAAAATAGATTTATCTTCGGTACTGAAGTCACTAAGGAGAGGGAAAAGGGCTTGGGCTATTGGAACATGTTCTCTTATAATACCACTTACACTCAGCACAACTTCTGCTATTCTTCTAAGGTTAACGTTGAGCTCTTCAGAAGAAAAACTATACTCAACCATAGTGCCCACTGCAGTTTTAATATCAACTACTTCCTTTCATGTCACTTCCTCTCATTTAGCAGATCTAAAACTCCTAAATTCAGATATTGGTAGAATAGGAGTTTCTTCATCTATTGTGGGTGGAACACTCTCTGCAATCTTGGTGACCATTTTGTTCTCACTTAGGCAAAGTAAACTAAGGCATGATAACTCTTTCAGTATGATGATGGGTTCTTTGATTGTTATGGCGATTTTCATAGCATATGTTCTTAGGCCTATCATGATTTGGATGATACGCCAGACACCAAAAGGGAAACCAGTCAAAGAGTCCTACATAGTCTCAGTATTTTTTATGTTATTGGGTTGTGCATACATTGGGGAGTCCATTGGGGAGCACTTCATGATAGGGCCTATTCTTTTGGGATTGGCAGTACCAGATGGACCCCCATTAGCATCAGCATTGGTTGAAAAGCTAGAAACCATGGTCTCATCAGTGTTTTTGCCTTTGTACTTCCTCTACAGTGGTTCCAAATTCAAGGTCTTTTTAATAGATGCCCCTAGCTTTGCAGTTGTGCAGCTTGTGGCTTTTATTAGCTTATTTGGCAAGGTTATAGGAACCATGCTTCCTTCAATTTACTGCAAGATGCCTGTGGTTGATGCTCTCTGCTTAGGTCTTATCCTCAGTGCTCGCGGCATCACCGAGTTGCTTTACTTTCAAGCTTGCCTACACTATCTTGTTATGGATGGACAATCATATGGTAACATAGTGATAGCTTTGTTATGGATGACGGGACTGACCACACCCATTGTAAGATACCTGTATGACCCATCTAAGGGGTACTTATCCTTAAATAGGAGGAGAAACATTCAGCATGCTTCTCCTGGTGTTGAACTTCAACTCATGGCTTGCATATACAGTGAAGAAAACTCCCCTTCCATCATCAACATTCTAGAAATGTCCAACTCCACGCATGAAAGTCCCATTTGTTTTCATGTCTTGCATCTCATTCAACTCACAGGAAGAGCAACTCCACTTTTCATAGATCATCAACTAGGGGACAAGATCACTTCCGACTCATCAGTACACACAACTCAATCACAACACATAGTAAATGCATTTAGATTGTATGAGGAGCAGAATCTAGGTACAGTGGTGGTAAAAATCTTCACATCCATCTCCCCTTATGATACAATGCATGATGAGATATGCATGCAAGCCGCAGAGAAGAGAGTATCAATGTTGATTGTACCTTTTCATAGACAATGGACAATAAATGGGGTTTCAGAATCAGCACTCCCCATCAGAGCATTGAATCGCCATTTGCTTAGAACTGCACCTTGCTCAGTTGGGATACTAATTGAACGTGGTGCCTTGAATAGGAGTAGTGCTATAACATGTATGTCCTTTTATAGTGTTGGAGTGATTTTTATAGAAGGGACAGATGACCGTGAAGCCTTGGTATATGCAATGCGCATGGCTGAACGTCTTAATGTAAGGGTCACAGTGGTTCGGTTAGTAGAGCCAAGAAGGATGAAGAATAGGGTTTTGATGAATAGGGATAGTGATGCTAATCTAATTGATAAGTTTAAGGCTGATTACACTCATATAAAACGCCATGACTATAAAGAGGAAATTGTGAGAGATAGCGTGGAAGTTATCAATGTGGTACGGTCACTAGAAGGTTGCTTTGATTTAATTTTGGTGGGTAGACGCCATGCAAGTGAGTCATCATCATTGTTCAATGGATTAACTGAATGGAATGAATATCCGGAACTTGGTTGCGTGGGAGACATGTTAGTGTGTTCAGATTCAACATTTGATGGGTCTGTGTTGGTGATTCAGCAACAAAAGTTAGGGGCTGTTCACCATGTTGAGTATGTAGATTCTTCCATCATCAATACTAAGCAAGAACCCTTCACCGTTGTGGAAATGCCCCATGGCACAAAGGTGTAG 2478 0.4027 MAGSSALNMSMFGNSALDNNIYVCEINRSKFQRSSGIFFGENPLKFTLPVIVLQTCLVGLLTTILQLLLIPHGVTNFPPRLLAGLIMGPSILGEIDLVRKYLFPPRTYYINDTIAFFGSMMYMFVIGIKIDLSSVLKSLRRGKRAWAIGTCSLIIPLTLSTTSAILLRLTLSSSEEKLYSTIVPTAVLISTTSFHVTSSHLADLKLLNSDIGRIGVSSSIVGGTLSAILVTILFSLRQSKLRHDNSFSMMMGSLIVMAIFIAYVLRPIMIWMIRQTPKGKPVKESYIVSVFFMLLGCAYIGESIGEHFMIGPILLGLAVPDGPPLASALVEKLETMVSSVFLPLYFLYSGSKFKVFLIDAPSFAVVQLVAFISLFGKVIGTMLPSIYCKMPVVDALCLGLILSARGITELLYFQACLHYLVMDGQSYGNIVIALLWMTGLTTPIVRYLYDPSKGYLSLNRRRNIQHASPGVELQLMACIYSEENSPSIINILEMSNSTHESPICFHVLHLIQLTGRATPLFIDHQLGDKITSDSSVHTTQSQHIVNAFRLYEEQNLGTVVVKIFTSISPYDTMHDEICMQAAEKRVSMLIVPFHRQWTINGVSESALPIRALNRHLLRTAPCSVGILIERGALNRSSAITCMSFYSVGVIFIEGTDDREALVYAMRMAERLNVRVTVVRLVEPRRMKNRVLMNRDSDANLIDKFKADYTHIKRHDYKEEIVRDSVEVINVVRSLEGCFDLILVGRRHASESSSLFNGLTEWNEYPELGCVGDMLVCSDSTFDGSVLVIQQQKLGAVHHVEYVDSSIINTKQEPFTVVEMPHGTKV* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1228 825 CDD USP_Like 658 757 - -
Lan9g1228 825 Gene3D - 500 759 - -
Lan9g1228 825 Pfam Sodium/hydrogen exchanger family 60 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan9g1228 825 Gene3D - 50 453 IPR038770 -
Lan9g1228 825 PANTHER CATION/H+ EXCHANGER 2 21 802 - -
Lan9g1228 825 PANTHER CATION/H + ANTIPORTER 21 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1228 Lan-Chr9 19568266 19571598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1228 34 790 Antiporter Super Family AT2G13620 36.398 1.32e-153 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1228 - - aprc:113874437 1000.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0063 4 837232 840368 Lan9g1228 9 19568266 19571598 PCT
Lan9g1227 9 19562055 19566148 Lan9g1228 9 19568266 19571598 PCT
Lan9g1228 9 19568266 19571598 Lan4g0063 4 837232 840368 PCT
Lan9g1228 9 19568266 19571598 Lan9g1227 9 19562055 19566148 PCT