Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1227 ATGGCTGAACATAGACCGCACGTAGGAAAATTTGTGTGTGACATGTCACCCAAGTTTCAAAGATCAAATGGAATATTTTTTGGTAGTAACCCATTGAAACACACGCTATCTGTGATAATTCTACAATCATCTAGTACTGGATTGTTGATAGCATTTTTACATGCCATTCTTTCCTCACTTGGAGTAACAACAATCTTTTCACAGCTCCTGGCTGGCTTGATAATGGGACCAGCAATACTTGGAGATATTGAAGTATTTGGAAAATATTTTTTCCCACCAAAGACTTTCTATGTAAATGACACAATAGCCTTGTTCGGGTGCACCATGTACTTGTTCCTAATTGGAATCAAAATAGATTTATCTAATGTACTGAAAGCACTAAAAGAGAGTAAAAGGAGTTGGGCCATTGGTGCATGTTCTTTTATGATACCACTCATTCTTAGCGTAGGTTCTGCTCTTTTTCTACGTTCAATGTTGATCTCTACGAACCACAGATTGCACTCATCCATAGTTTCCCTTGCGGTTTTATTTTCAATTAGTTCCTTCCATGTTACTGCCAATCATTTAGCAGATTTAAAGCTCCTAAATTCTGAGCTTGGTAGAATAGGAGTATCTTCAACTATAGTGAGTGGAGTACTCTCTACAAGCTTGATCACCGGAGTATTGACAAGTTCACAAAAAAAACATGAAGAGCGCGACAACTCTTACAATATGATGATCCTTTCTGCGATTGCTTTGGTGATTTTCATAGTATATGTTCTTAGGCCAATCATGTTTTGGATGATACGCCAAACACCAAAAGGGAAACCAATGAAAGAGTCCTACATACTCTATGTTCTTCTCATGTTGTTGGGGAATACATTAATGGGAGAGGTAATTGGAGAGCACTTTGTGTTTGCACCTATTATTATGGGATTGGCAGTTCCTGATGGACCCCCTTTGGCTACAGCATTGGTTGAAAAGCTAGATGCCATTGTCTCATCACTGTTTTTGCCCTTGTACTTCCTCTTTTGTGGTTCCAAATTCAAGATTTCTTTAATGGATGCACATAACTTTGCAGTTGTGCAGCTTGTGGCTTTGATTTGCTTCATTGGAAAGGTTATAGGAACCATTCTTCCTTCACTTTTCTACAAGATGCCATTGGTTGATGCTATCTGCTTAGGTTTCCTCGTGAGTGCCCATGGCATCACCCAGTTGATTTACTTGCAAACTTCTTTGCATCTTGGTATTATAGATGAAGAATCATATGGTAACGTGGTGATAGCTTTGTTATGGTCAGCAGGAGTGTCCACACCAGTAGTGAAATTCCTGTATGACCCATCTAAGGGGTACATGGCCGTAAGTAGGAGGAGGAACATTGAGCATGCCTTTCCCAATGCAGAACTTCAATTCATGGCATGCATTCATTGTGCAGAAAATTCCTTATCTATCATCAATATTCTTGAAATGTCAAACCCTACACAGGAGAGTCCTATTTGTCTCTATGTACTGCATCTAGTTCAACTTAAAGGAAGTACAGCTCCACTTTTCATAGATCACCAACAAGTCAAAAAGAATTACCCTGAATCATTATACTCTAGTCAATCAGAGTGCATGATAAATGCATTCAGATCATATGAGAAGCAGAATTCAGGCAAAGTGGTGACAAAACTCTTCACATCCATCTCCCCTTATGAAACAATCCATGATGAGATATGCCTGCAAATTGTAGAGAAGAAAGTATCTATGTTGATTGTACCTTTTCATAGATTATGGATATCAACTGAGATTACAGAATCAACACAACCCATCAGAGCATTAAACCGCCATTTACTTAGAATTGCACCTTGCTCAGTTGGGATCCTAATTGAAAGTGGAACCTTGAATAGGAACAGTGCTATAACATGTTTATCTTTTTACAGTGTTGGGGTTGTTTTTATAGAAGGTCCAGATGATCGTGAAGCCTTGGCATATGCAATGCGCATGGCTAATGGCCCTAATGTAAGGGTCACACTGGTTCGGTTAGTAGAACCACACAAAAAAAGTAAGACTTTAATCAATAGGGATCACGATGGTAAACTAATTCACCAGTTTAAGTTTGAATACGTTCATGTCAAACACCATGATTATAGAGAGGAAATTGTGAGAGATGCGGTGGATGTAACCAACGTTGTAAGATCACTAGATGGTTGCTTTGATTTACTTTTGGTGGGTAGAAGCCATGCAAGTGAATCAACACAATTGTTTAGTGGATTAGCTGAATGGAATGAGTACCCAGAACTTGGTTATGTAGGAGACATGTTAGTATCTTCACATTCTTCATTTGTTGGGTCTGTGTTAGTGGTGCAACAACAGAGGTTAGGGGCTGCTGCAAGTTATCATGATGACCATTTGGACACTTCCTCACACTCCATCAAAAGTGGCCAAAGCTGGGCTTAA 2418 0.3921 MAEHRPHVGKFVCDMSPKFQRSNGIFFGSNPLKHTLSVIILQSSSTGLLIAFLHAILSSLGVTTIFSQLLAGLIMGPAILGDIEVFGKYFFPPKTFYVNDTIALFGCTMYLFLIGIKIDLSNVLKALKESKRSWAIGACSFMIPLILSVGSALFLRSMLISTNHRLHSSIVSLAVLFSISSFHVTANHLADLKLLNSELGRIGVSSTIVSGVLSTSLITGVLTSSQKKHEERDNSYNMMILSAIALVIFIVYVLRPIMFWMIRQTPKGKPMKESYILYVLLMLLGNTLMGEVIGEHFVFAPIIMGLAVPDGPPLATALVEKLDAIVSSLFLPLYFLFCGSKFKISLMDAHNFAVVQLVALICFIGKVIGTILPSLFYKMPLVDAICLGFLVSAHGITQLIYLQTSLHLGIIDEESYGNVVIALLWSAGVSTPVVKFLYDPSKGYMAVSRRRNIEHAFPNAELQFMACIHCAENSLSIINILEMSNPTQESPICLYVLHLVQLKGSTAPLFIDHQQVKKNYPESLYSSQSECMINAFRSYEKQNSGKVVTKLFTSISPYETIHDEICLQIVEKKVSMLIVPFHRLWISTEITESTQPIRALNRHLLRIAPCSVGILIESGTLNRNSAITCLSFYSVGVVFIEGPDDREALAYAMRMANGPNVRVTLVRLVEPHKKSKTLINRDHDGKLIHQFKFEYVHVKHHDYREEIVRDAVDVTNVVRSLDGCFDLLLVGRSHASESTQLFSGLAEWNEYPELGYVGDMLVSSHSSFVGSVLVVQQQRLGAAASYHDDHLDTSSHSIKSGQSWA* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1227 805 Gene3D - 38 443 IPR038770 -
Lan9g1227 805 Pfam Sodium/hydrogen exchanger family 48 437 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lan9g1227 805 PANTHER CATION/H + ANTIPORTER 9 788 - -
Lan9g1227 805 PANTHER CATION/H+ EXCHANGER 2 9 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1227 Lan-Chr9 19562055 19566148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1227 16 797 Antiporter Super Family AT2G13620 34.777 1.50e-146 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1227 - - aprc:113874437 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0063 4 837232 840368 Lan9g1227 9 19562055 19566148 LSH
Lan9g1227 9 19562055 19566148 Lan9g1228 9 19568266 19571598 PCT
Lan9g1228 9 19568266 19571598 Lan9g1227 9 19562055 19566148 PCT