Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1226 ATGTTACCATTATCTTTTTCAGGTAGCAATGGGACCAAGATTTGGCGTATCGTTATGATGCATGTTTGCACCAGTGTTGTTGTAACAAGCAAATGCATTGCTTTGTCTTCACCCAACTTCTCATCCATTCTAGTTTTTGGAGATTCAACAGTGGACTCAGGCAACAACAACTATATTCTAACATTGGGTAAGGTAAATCATTTCCCTTATGGAAAGGATTTTCCTGGTCATGTTCCCACAGGTAGATTCTCTAATGGAAAATTGGTTACTGATTTATTAGCTTCTTATTTGAATATCAAAGATACTGTCCCTCCTTTTCTGGACCCAAACCTATCAAATGATCAACTTCTTACTGGTGTTTGCTTTGCATCTGGTGGAGCTGGATTTGATGATTTCCCTTTAGGTTCCTTAGGTGGTGGTAGCATATCAATGTTCAACCAACTTGGTTTATTCAGAGTTTATGTAACAAAGCTCAAGGGAATTGTAGGGGAAGATAAAGCTAGACAAATACTTGGAGATGCTCTAGTTGTAATCAGTGCAGGAACTAATGACTTCGTTAACAATTTTTATAACCTCCCCACTAGAAGGATGATGTTCAACATGGATATGTACCAAGATTTTCTGCAGTATAAGCTTCAAGTTTTCATCAAGGACCTATACGACCTTGGTTGCAGAAAATTTGGCATAAGTGGGCTTCCTCCAATTGGTTGCATACCCTTTCAAATAACAGTGAAGCATGAGAAGGATCGGAAATGCGTAGAGGATGAGAATTCAGATTCTAAGCTATATAATTTGAAATTGACAGAGCGATTACCTCAATTACAAGCATTACTTCCAGGAAGCAGACTTGTTTATGGAGACATATACGATCCATTGATCAACCTTATCACTCAACCTCATAAATATGGAGTGGAGATAACAAATCGAGGGTGTTGCGGGACCGGGCTGTTTGAAGTAGCTCCATTGTGTACTGAATTAACACCTGTATGTAATGATGCTTCAAAATATGTATTTTGGGACAGTTTACATGCAAGTGAAGTAACCAACCAGTATGTTGCTAAGTACTTAGAAATACAAGGCCTGCCCCAGTTCCAAATTTAA 1101 0.3851 MLPLSFSGSNGTKIWRIVMMHVCTSVVVTSKCIALSSPNFSSILVFGDSTVDSGNNNYILTLGKVNHFPYGKDFPGHVPTGRFSNGKLVTDLLASYLNIKDTVPPFLDPNLSNDQLLTGVCFASGGAGFDDFPLGSLGGGSISMFNQLGLFRVYVTKLKGIVGEDKARQILGDALVVISAGTNDFVNNFYNLPTRRMMFNMDMYQDFLQYKLQVFIKDLYDLGCRKFGISGLPPIGCIPFQITVKHEKDRKCVEDENSDSKLYNLKLTERLPQLQALLPGSRLVYGDIYDPLINLITQPHKYGVEITNRGCCGTGLFEVAPLCTELTPVCNDASKYVFWDSLHASEVTNQYVAKYLEIQGLPQFQI* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1226 366 Gene3D SGNH hydrolase 31 359 IPR036514 -
Lan9g1226 366 SUPERFAMILY SGNH hydrolase 42 356 - -
Lan9g1226 366 Pfam GDSL-like Lipase/Acylhydrolase 43 356 IPR001087 GO:0016788
Lan9g1226 366 CDD SGNH_plant_lipase_like 42 356 IPR035669 -
Lan9g1226 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 34 355 - -
Lan9g1226 366 PANTHER GDSL ESTERASE/LIPASE EXL3 34 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1226 Lan-Chr9 19556051 19559209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1226 30 353 Acyl Lipid Metabolism Gene Families AT4G10950 30.982 3.35e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1226 - - lang:109360817 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1029 2 21334174 21337532 Lan9g1226 9 19556051 19559209 LSH
Lan11g0372 11 2688631 2690158 Lan9g1226 9 19556051 19559209 LSH