Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1225 ATGGCTGAAAACGGTGAAGAGAAATTACTCGCTGTGGCGCGGCACATCGCAAAAACCTTAGGCCACAACAACAATAACATGGCTGATGATATTCTTCAAATCTTTTCAAACTTCGATGGAAGGTTCTCTAGAGAGAATCTCTCCGGTAAGGTTCCAGATTCTGATCCTAGAGCCTGCGCCGTACTGGATCACTCCCTCAAGTCCCTCGACCGCCGTATCTCTCATTATGTCTCCTCCGACCACCCGATCTGGGCTGACTCTGCTGACTCCGCCGCCTTCCTCGACGCCGTTGATGACCTCGTTGCCGTTGTCTCTGAATGGAGTCCACTTGCTTCCGATAAGTCCGTTGGCGCGTGTCTCTCACGCGCAGAGGATATGTTACAGCATGCTATGTTCCGTCTTGAGGATGAGTTTCGTTCCCTTATGGAGCGTGGTGGCGAGTCCTTCGATCTGACTCGTCCGGAGAACGAGTCAACTCGGAATAACATGCCGTTTGACTCGGAGGAAGAGGATGATGATGCGGAAGAAGAAACAAGGAACGGAGAAGAGGAGGAACAGATTCCGGTAGCGCTTCCGGTAACCGATTATGATATTGTGATTGATGCGTTGCCGTCGGGAACGATCAGCGACCTTCATGAGATCGCGAAGAGAATGGTGGCGGGAGGATTCGGGAAGGAGTGTTCGCACGTGTATAGCAGTTGCCGGAGGGAGTTTTTGGAAGAAAGCTTTTCGAGGTTAGGGTTACAGAAACTGAGCACAGAGGAGGTTCACAAGATGCCATGGCAGGAACTCGAAGACGAAATCGAAAGATGGATCAAGGCTTCAAACGTCGCTCTTAGGATTCTGTTCCCAAGCGAAAGGAGACTCTGTGATCGCGTGTTCTTCGGATTCTCCTCTGCTGCAGATCTCTCATTCATGGAGGTTTGCAGAGGATCCACGATTCAGCTTCTCAATTTTGCTGATGCCGTCGCGATTGGAAGCCGTTCGCCGGAGCGGTTGTTTAGAATCCTCGATGTGTTTGAGACATTGCGTGATCTAATTCCAGAGTTTGAGTCCTTGTTTTCTGATCATTACAGCGTGTTGCTGAGAAATGAAGCAATTACGATCTGGAAGAGGTTAGGGGAAGCAATTAGGGGAATTTTCATGGAATTGGAGAATCTAATCCGGCGTGATCCAGCGAAAGCGGCTGTTCCTGGTGGTGGACTTCATCCAATTACTCGCTACGTGATGAACTACCTCCGAGCTGCGTGCCGGTCTCGGATATCCCTGGAGCAAGTATTTGAAGAATATCCAAAGCTTGATGATAGAGTTGCATCCACTTCTTCACTATCAGTACAAATGGATTGGATTATGGAGTTGCTTGAGAGCAATTTGGAAACCAAATCCAAGATATACAAGAACACTGCTTTGAGCTATGTTTTCTTGATGAATAACGGGAGGTACATAGTTCAAAAGGCAAAAGATAGTGAATTGGGAGCCCTATTGGGCGATGATTGGATCAGAAAACACACTGCAAAAGTTATACAGTACCATGTGCATTATCAGAGAAGTTCGTGGAATAAAGTGTTAGGGGTTCTGAAATTGGATAGCAGCAATGTATCAATGGGACCTAATGGCGAAGCGAAGACAATGAAGGAGAAGATCAAGTTGTTCAACGTGCAGTTTGATGAGATATGCAAGGTTCAGTGTTCATGGTTTGTGTTTGATGAACAGCTGAGGGAAGAAATAAGATCGTCCCTTGAGAAAACCTTGTTGCCAGCATATGGAAGCTTCATTGCGAGGTATCAAAGTGTTCCGGAACTTGATAAGTATGCTGATAAGTATATTAAGTATAGAATGGAGGACATTGAAACAAAACTTAATGATTTGTTTCAAGGAAGTAGTGGATCAAATGGTAGCCGTAAGTGA 1908 0.4649 MAENGEEKLLAVARHIAKTLGHNNNNMADDILQIFSNFDGRFSRENLSGKVPDSDPRACAVLDHSLKSLDRRISHYVSSDHPIWADSADSAAFLDAVDDLVAVVSEWSPLASDKSVGACLSRAEDMLQHAMFRLEDEFRSLMERGGESFDLTRPENESTRNNMPFDSEEEDDDAEEETRNGEEEEQIPVALPVTDYDIVIDALPSGTISDLHEIAKRMVAGGFGKECSHVYSSCRREFLEESFSRLGLQKLSTEEVHKMPWQELEDEIERWIKASNVALRILFPSERRLCDRVFFGFSSAADLSFMEVCRGSTIQLLNFADAVAIGSRSPERLFRILDVFETLRDLIPEFESLFSDHYSVLLRNEAITIWKRLGEAIRGIFMELENLIRRDPAKAAVPGGGLHPITRYVMNYLRAACRSRISLEQVFEEYPKLDDRVASTSSLSVQMDWIMELLESNLETKSKIYKNTALSYVFLMNNGRYIVQKAKDSELGALLGDDWIRKHTAKVIQYHVHYQRSSWNKVLGVLKLDSSNVSMGPNGEAKTMKEKIKLFNVQFDEICKVQCSWFVFDEQLREEIRSSLEKTLLPAYGSFIARYQSVPELDKYADKYIKYRMEDIETKLNDLFQGSSGSNGSRK* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1225 635 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 30 625 - -
Lan9g1225 635 SUPERFAMILY Cullin repeat-like 84 624 IPR016159 -
Lan9g1225 635 MobiDBLite consensus disorder prediction 166 182 - -
Lan9g1225 635 Gene3D Exocyst complex component Exo70 83 634 - -
Lan9g1225 635 MobiDBLite consensus disorder prediction 146 187 - -
Lan9g1225 635 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 625 IPR004140 GO:0000145|GO:0006887
Lan9g1225 635 Pfam Exo70 exocyst complex subunit 269 622 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1225 Lan-Chr9 19553244 19555447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1225 1 628 EXO70 exocyst subunit family AT5G58430 72.134 0.0 913
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1225 K07195 - gmx:100803694 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1028 2 21325770 21327921 Lan9g1225 9 19553244 19555447 LSH