Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1221 ATGGGATACACTTCATTGCGTAGAAACCCAAAGAAAGAAGAACAACAAGTACCAGACACTCTCACTGACCCTTATGCTCATGAAGAATTCAATATCTTGGATGAACTTCATGTGGTCTTGGACATTGAAGAACAACAAAATATTTCACCAAATGAAACTTCAAGTGGTAAGCTTCATTGGGATTTCATGGAATGGGAAGAATTTTCCACCATTGGAGAGGAAGCAGAAGATGATGAAGGGAAAGTGGGAGTGAAAGATAAGAGCATAAACAATAGCATTTTGAAGGAGAAGGAGATAAAAAGAGAAAATATTTTTGGGTTTTGTGAAGTTAATGATGAGAAGATGATGGCTTTGAATTTGAACTTGAACTATCAAGATGTTTTGGATGCATGGTCTGATCGTAGGTCACCTTGGGCTGATGATTATTCTTTTTCAATGGCCACCAATAATGGCTACTATATGGGGGAAGTGCCAATATTGGAAGAAGAGAGAAGAAGAAGGGAAGCAAGTGTTCTTAGGTATAAAGAGAAGAGGCAGAATAGATTGTTCTCCAAGAAGATAAGATACCAAGTTCGGAAGATAAATGCTGATAAAAGACCCAGAAACAAGGTCACTTTAAATTTAATTTCCTATTTCTTTTCACTTTTCAGCTATTGGGTTTTGCACTTTGGTCACTTCACTTTGTTTTCTATTGAGATACAACTTTCTGATATTTTGGTTGTAGGGTCGCTTTGTGAAGAGACATTGAGGTTACTCAAGAGTAAGATCCCAAACCAAAAATATCTTCCCAAAATATCTAAGATCACTTCCCCTACATTTATTTAA 825 0.3648 MGYTSLRRNPKKEEQQVPDTLTDPYAHEEFNILDELHVVLDIEEQQNISPNETSSGKLHWDFMEWEEFSTIGEEAEDDEGKVGVKDKSINNSILKEKEIKRENIFGFCEVNDEKMMALNLNLNYQDVLDAWSDRRSPWADDYSFSMATNNGYYMGEVPILEEERRRREASVLRYKEKRQNRLFSKKIRYQVRKINADKRPRNKVTLNLISYFFSLFSYWVLHFGHFTLFSIEIQLSDILVVGSLCEETLRLLKSKIPNQKYLPKISKITSPTFI* 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1221 274 Pfam CCT motif 167 203 IPR010402 GO:0005515
Lan9g1221 274 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 203 - -
Lan9g1221 274 MobiDBLite consensus disorder prediction 1 23 - -
Lan9g1221 274 ProSiteProfiles CCT domain profile. 167 209 IPR010402 GO:0005515
Lan9g1221 274 PANTHER CCT MOTIF FAMILY PROTEIN 3 203 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan9g1221 Lan-Chr9 19487374 19489451 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1221 106 203 C2C2-CO-like Transcription Factor Family AT1G25440 40.833 2.91e-16 76.3
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g1221 CCT 3.3e-14 CL0281
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1221 - - aprc:113847792 286.189