Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1217 ATGTCAAAAGTGGTGTGCGTTACCGGCGGTAGTGGCTGCATTGGTTCATGGCTGGTGCATCTCCTTCTTGATCGTGGCTACACCGTTCACGCTACGGTCAAAGATCTCAATGATGAGGCCGAAACTAAGCATCTTGAAGCCCTTGATGGAGCTGCCACCCGTCTCCGCCTCTTCCAGCTCGATCTCCTCCGCTACGATTCTGTCTCCGCCGCGATCAATGGCTGCGCCGGTGTTTTCCACCTCGCCTCCCCTTGCATTGTCGACCAAGTTCACGACCCTCAGAAGGAGCTTCTGGACCCGGCGATTAAGGGAACAATGAATGTGCTTAAGGCGGCGAAGGAAGCAGGGGTGCAGCGCGTGGTGGTCACTTCTTCGATCTCGGCTATTACCCCAAGCCCTAGTTGGCCTTCTGATGTTGTTAAAAGAGAAGATTGCTGGACTGATATTGAATACTCTAAGCAAAAGGGGTTGTGGTATCCACTGTCAAAGACATTAGCTGAAAAAAGTGCTTGGGATTTTGCCAAGGAGAATGGTTTGGATGTTGTGGTGGTGAATCCTGGCACTGTGATGGGTCCTGTTATTACACCCAGACTCAATGCAAGCATGCTTATGCTTGTGCGCCTTCTTCAAGGTTGCGATGAAACATATGAGGACTTTTTTATGGGGTCGGTTCACTTTAAAGATGTAGCCTTGGCACATATTTTGGTGTATGAGAACAAAGCAGCAACTGGTAGGCATTTGTGTGTTGAAGCTATCTCTCACTACGGTGACTTTGTGGCAAAAGTTGCTGAACTTTATCCAGAGTATAATGTACCGAAGATTCAACAAGATACCCAACCAGGATTGTTGAGAGCAAAGGATGGAGCCAAGAAGCTTATGGATATGGGTTTGCAATTCATTCCAATGGATCAAATTATTAAGGATGCCATAGAGAGTTTGAAGAACAAAGGGTTCATTTCTTAA 963 0.4735 MSKVVCVTGGSGCIGSWLVHLLLDRGYTVHATVKDLNDEAETKHLEALDGAATRLRLFQLDLLRYDSVSAAINGCAGVFHLASPCIVDQVHDPQKELLDPAIKGTMNVLKAAKEAGVQRVVVTSSISAITPSPSWPSDVVKREDCWTDIEYSKQKGLWYPLSKTLAEKSAWDFAKENGLDVVVVNPGTVMGPVITPRLNASMLMLVRLLQGCDETYEDFFMGSVHFKDVALAHILVYENKAATGRHLCVEAISHYGDFVAKVAELYPEYNVPKIQQDTQPGLLRAKDGAKKLMDMGLQFIPMDQIIKDAIESLKNKGFIS* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1217 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 314 IPR036291 -
Lan9g1217 320 Pfam NAD dependent epimerase/dehydratase family 5 240 IPR001509 -
Lan9g1217 320 CDD FR_SDR_e 5 297 - -
Lan9g1217 320 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 3 311 - -
Lan9g1217 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 311 - -
Lan9g1217 320 Gene3D - 1 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1217 Lan-Chr9 19470341 19473430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1217 3 320 Monolignol Biosynthesis Gene Families AT5G58490 77.673 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1217 - - gmx:100800492 578.941