Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1211 ATGGCTGCAGCCTTGGACTGCTGGTCCAACCGCACCACCACCACCACCACCACCACCTCCGACGACGACACCGTGGAACAAGTCCTCATGAGGTCCCACCATAGATCCGAGCTACCTATAACTCCTTCACTCTCTTCATCTTCATCAACAAAAGACTCTTCTTTGCTCCACAACAAGTTTCAGAAGCTCACTCGCAATGTTTCAGAAGCCATAGCATCATTCAAAAACTCCCTCAACCTTGATTCTCCTCGCGACCCATCTTCTTCAAAGATCGAAGCTTCTAGAAAAATCGCATGGGGTACCGTTGTTAGGAACCTTACACAACTCTACCCTGGAAGCCAGCTTCCTGAGAAGCTCATGTCAAATATTCGCAACCATTATGATTCTTTGCCTCTCAGTTATGGACAGGCAGAATTTGATATGAAAGATGTGTTTCTTCACATCAAGCTGATAGAGCAAGCATCAGAGACTGAACAGCCTGCAATTTTGTTCCAAGAAGAATCTGATAATGATGGTGAACTTCAAGGGTCTTTGTTGAAGCTCACTTTTGCTTGTAACTCCCCAATTTCATGGCCTGCAATGTCAAGTGCATTGGATAGTTCATCCATCAGTTGCAAGAAGATGCAGATATTTGAGAAGAAAGGTTTCACCTTGGGGATTGTTATTCTTGTTTTTCAGTCTGAGCAAGATAGATTGGTTAGAATGCAAACCGAAAACGCTCTAAAGTTTGCCATGAAGAAGCCAAAAACCAGTTCTGTGAAGCTTCCATTTGGACTTTGTGGATGTCAAGAAGAGAATTTCAAGGGGAGAGAATTTGGAGAGAGTGAAGAAGTCAGCGGTGATGTGTGTTACGGAAAGGAGATTGAGAATTCGAGCCAAAAGATTCAGCTTCAGACACCATTGCCTAGTTCATCTTTTATTGTATCAGTAGATGAATGGCAGACAATTCAGTCAGGAGGGAAAAATATTGAGAAATGGTTGTTGAATTCTGATAGTGTTGAGTTTACTGATCAGATTGGATTTGGACCAAATTCTTATAAAGGGGTCTACATGGGCAAAAGGGTTGGGATTGAGAAGCTTAAAGGGTGTGACAAAGGGAATTCCTATGAGTTCGAGCTCAGAAAAGATCTGTTGGAACTGATGACTTGTGGTCATAGAAACATTCTGCAATTTTGTGGTATCTGTGTGGATGATAATCATGGTTTGTGTGTGGTGACCAAGTACATGGAAGGTGGATCTGTTCATGACATGATGTTGAAGAACAAGAAGCTTCAGGTTAAACAAATTGTAAGAATAGCAGTAGATGTGGCTGAGGGTATGAAGTTTTTGAATGATCACGGTGTTGCATATAGAGACCTCAACACTCAGAGAATTCTATTGGATAGGCATGGTAATGCTTGCTTGGGAGATATGGGTATAGTCACTGCCTGCAAGAGTATTGAAGAAGCAATGGAGTATGAAACTGATGGTTACAGGTGGCTAGCTCCAGAGATAATAGCAGGTGACCCAGAGAGTGTGACAGAGACATGGATGAGCAATGTTTATAGTTATGGAATGGTGATTTGGGAGATGGTAACTGGTGAAGCAGCTTATTCAGCACTTTCACCAGTGCAAGCAGCAGTAGGCATTGCTGCATGTGGCCTTAGACCTGAAATCCCCAAAGACTGTCCTCAAACACTGAAATATCTTATGACAAAGTGCTGGCACAACACCCCTTCAAAACGTCCTCACTTTTCTGATATCTTAGCAATGTTACTGAGACCAAACAACAATAGGTAA 1779 0.4255 MAAALDCWSNRTTTTTTTTSDDDTVEQVLMRSHHRSELPITPSLSSSSSTKDSSLLHNKFQKLTRNVSEAIASFKNSLNLDSPRDPSSSKIEASRKIAWGTVVRNLTQLYPGSQLPEKLMSNIRNHYDSLPLSYGQAEFDMKDVFLHIKLIEQASETEQPAILFQEESDNDGELQGSLLKLTFACNSPISWPAMSSALDSSSISCKKMQIFEKKGFTLGIVILVFQSEQDRLVRMQTENALKFAMKKPKTSSVKLPFGLCGCQEENFKGREFGESEEVSGDVCYGKEIENSSQKIQLQTPLPSSSFIVSVDEWQTIQSGGKNIEKWLLNSDSVEFTDQIGFGPNSYKGVYMGKRVGIEKLKGCDKGNSYEFELRKDLLELMTCGHRNILQFCGICVDDNHGLCVVTKYMEGGSVHDMMLKNKKLQVKQIVRIAVDVAEGMKFLNDHGVAYRDLNTQRILLDRHGNACLGDMGIVTACKSIEEAMEYETDGYRWLAPEIIAGDPESVTETWMSNVYSYGMVIWEMVTGEAAYSALSPVQAAVGIAACGLRPEIPKDCPQTLKYLMTKCWHNTPSKRPHFSDILAMLLRPNNNR* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1211 592 MobiDBLite consensus disorder prediction 1 52 - -
Lan9g1211 592 Gene3D Transferase(Phosphotransferase) domain 1 327 589 - -
Lan9g1211 592 SUPERFAMILY Protein kinase-like (PK-like) 309 585 IPR011009 -
Lan9g1211 592 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 589 - -
Lan9g1211 592 PANTHER SERINE-THREONINE PROTEIN KINASE 1 589 - -
Lan9g1211 592 MobiDBLite consensus disorder prediction 7 25 - -
Lan9g1211 592 ProSiteProfiles Protein kinase domain profile. 333 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1211 592 PRINTS Tyrosine kinase catalytic domain signature 406 419 IPR001245 GO:0004672|GO:0006468
Lan9g1211 592 PRINTS Tyrosine kinase catalytic domain signature 442 460 IPR001245 GO:0004672|GO:0006468
Lan9g1211 592 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672|GO:0006468
Lan9g1211 592 PRINTS Tyrosine kinase catalytic domain signature 556 578 IPR001245 GO:0004672|GO:0006468
Lan9g1211 592 Pfam Protein tyrosine and serine/threonine kinase 370 584 IPR001245 GO:0004672|GO:0006468
Lan9g1211 592 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1211 Lan-Chr9 19438304 19442325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1211 324 585 MAP Kinase Kinase Kinase AT2G17700 34.586 1.45e-52 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-7 Lan9g1211 PK_Tyr_Ser-Thr 3.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1211 - - gmx:100801110 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1017 2 21225424 21229223 Lan9g1211 9 19438304 19442325 LSH
Lan2g1017 2 21225424 21229223 Lan9g1211 9 19438304 19442325 PCT
Lan9g1211 9 19438304 19442325 Lan2g1017 2 21225424 21229223 PCT
Lan9g1211 9 19438304 19442325 Lan9g1211 9 19438304 19442325 PCT