Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1191 ATGGATAATTTGGATTTGGAGAACAACACAAATAGTATATCACAAATGGTGAGAAACAAGTCAGATCCAGTTATATTCACAAACCAAATGCTAAGAAATTTCATGGCCAATTTTCAACAAGTTATATTTGCCTCTAAGCTTTCTTTGCTTTTTCTGGCTGTCCCTTTAGCTCTTGTTGCAAATTTTCAAGGCTTTGCAAGGCCTTGGATATTTGCTTGGAGCTTACTTGGACTTGCCCCGCTAGCTGAACGTGTCAGCTTTCTCACCGAGCAAATTGCTTACTACACTGGCCCGACAGTTGGAGGGCTTCTAAATGCAACATGTGGTAATGCAACAGAGATAATCATTGCATTATATGGACTAAGCAAGAACAAAGTAAATGTTGTGAAATTCTCCTTGTTGGGTTCTATTCTCTCAAACCTTTTATTAGTTCTTGGCACTTCACTTCTCTGTGCTGGATTAGCCAACCTTAAGAGGGAGCAAAAATATGACAGAAAACAAACAGATGTTAATTCTCTGCTTTTGTTGTTGGGGTTGCTATGCCATTTGCAGCCATTATTGTTCAAAATGGCCTTAGAAGGGGGTGATTCTTCTATTGCCACTTCTACTCTTCAATTATCAAGAGCAAGCAGCATTTTTATGCTTCTAGCATATGTTGCATATATCTATTTCCAGTTAAAAACTCATGGGAAATTATTTGATGCACAAGAGGAAGATGAAGATGAAGAGAAGCCCGTGATTGGATTTTGGAGTGCATTTATCTGGTTGGTGGGTATGACACTTGTCATATCTGTCCTTTCTGAATATGTTGTGGGAACCATTGAGGATGCTTCAGATTCTTGGGGCATTTCAGTTGGCTTTATCAGCATAATATTGCTACCAATTGTTGGGAACGCTGCAGAACATGCTGGCTCAGTTATTTTTGCTTTTAAGAACAAATTGGACATGTCATTGGGCATTGCGATGGGGTCAGCAACTCAGATTTCCATGTTTGTGGTTCCATTAAGTGTGGTGGTTGCATGGATAATGGATATACAAATGGATCTGGACTTTAATCTTCTTGAAACTGGGTGTCTTGCTTTTACAATCATTGTTACTGCGTTCACTTTACAGGATGGAACTTCACACTATATGAAAGGAGTGGTTCTTTCTCTATGCTACATTGTCATGGCTGCATGTTTTTTTGTTCACAAAACTCCACTAGACGGAAAAGATTAA 1218 0.39 MDNLDLENNTNSISQMVRNKSDPVIFTNQMLRNFMANFQQVIFASKLSLLFLAVPLALVANFQGFARPWIFAWSLLGLAPLAERVSFLTEQIAYYTGPTVGGLLNATCGNATEIIIALYGLSKNKVNVVKFSLLGSILSNLLLVLGTSLLCAGLANLKREQKYDRKQTDVNSLLLLLGLLCHLQPLLFKMALEGGDSSIATSTLQLSRASSIFMLLAYVAYIYFQLKTHGKLFDAQEEDEDEEKPVIGFWSAFIWLVGMTLVISVLSEYVVGTIEDASDSWGISVGFISIILLPIVGNAAEHAGSVIFAFKNKLDMSLGIAMGSATQISMFVVPLSVVVAWIMDIQMDLDFNLLETGCLAFTIIVTAFTLQDGTSHYMKGVVLSLCYIVMAACFFVHKTPLDGKD* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1191 405 Gene3D - 98 237 IPR044880 -
Lan9g1191 405 Gene3D - 238 396 IPR044880 -
Lan9g1191 405 TIGRFAM cax: calcium/proton exchanger 51 395 IPR004798 GO:0006816|GO:0015369
Lan9g1191 405 Pfam Sodium/calcium exchanger protein 252 393 IPR004837 GO:0016021|GO:0055085
Lan9g1191 405 Pfam Sodium/calcium exchanger protein 69 226 IPR004837 GO:0016021|GO:0055085
Lan9g1191 405 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 7 401 IPR004713 GO:0006812|GO:0008324|GO:0016021
Lan9g1191 405 PANTHER VACUOLAR CATION/PROTON EXCHANGER 7 401 - -
Lan9g1191 405 TIGRFAM caca2: calcium/proton exchanger 33 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1191 Lan-Chr9 19270558 19273338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1191 11 400 Antiporters AT2G38170 64.838 2.01e-176 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1191 K07300 - gmx:100816844 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g1191 9 19270558 19273338 Lan9g1191 9 19270558 19273338 PCT