Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1181 ATGAAGTGGGAAATGGAAATCCTTCCTCCTTCACCTTACACCTCAAACTCCAATAGTTATATGGAAGATAACAACAAAACAAAATGGACCCTTGAAGAGAACAAGCTATTTGAAAATGCTCTTGCAGTGTATGATAAGGATACATCAGATAGGTGGCACAAAGTGGCATCAATGATACCAGGAAAAACAGTTGAAGATGTTATGAGACAGTACAAGGAATTGGAAGCAGATGTTTGTGACATAGAAGCTGGTTTGGTTCCAGTTCCTGGCTATGATAGTGCTACTATTACTCCACCTTTCACCTTAGATTACATGGTTAATACTTCTGGCTATGATGGGTTTAAAGGAGGAATCAGTGGAAAGAGATCATCAGTTAGAACTCCTGATCAGGAAAGGAAAAAAGGAGTGCCATGGACCGAAGAGGAACACAAATTATTTCTACTAGGACTGAAGAAATATGGTAAAGGTGATTGGAGAAACATATCAAGGAACTTTGTTATTACAAGAACCCCAACTCAAGTGGCTAGCCATGCTCAAAAGTACTTTATTAGACAACTTTCAGGAGGCAAAGATAAGAGAAGAGCTAGTATCCATGACATAACAACAGTTAATCTCACAGAAACTACTGGAACTTCTTCAGATGACACCAAAAATTCCACTTCACCACAACATTCCATGATGTTCTCACAACAGTCAAATACTAATGCTACTTCACCAATACCTCATTTTCAGTGGAATGTTCAGCCAAATGCAGCAGGAGCAATTGTACCTATGAATCAAGCACATGATCAACTTTTCATGTCTCCTTATGACGTTAGTTCCTTTGGGCTTAACATGCAAGGCCAAAATATGCATCATCATGAGTCTTCTTACTTAGAACCTCAGACAGAGAACATGGTTTTCCAAATGCAACAGTCTTCAGAACACTTTCCTCATTCATAA 942 0.3875 MKWEMEILPPSPYTSNSNSYMEDNNKTKWTLEENKLFENALAVYDKDTSDRWHKVASMIPGKTVEDVMRQYKELEADVCDIEAGLVPVPGYDSATITPPFTLDYMVNTSGYDGFKGGISGKRSSVRTPDQERKKGVPWTEEEHKLFLLGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTETTGTSSDDTKNSTSPQHSMMFSQQSNTNATSPIPHFQWNVQPNAAGAIVPMNQAHDQLFMSPYDVSSFGLNMQGQNMHHHESSYLEPQTENMVFQMQQSSEHFPHS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1181 313 Gene3D - 136 186 - -
Lan9g1181 313 ProSiteProfiles Myb-like domain profile. 130 182 IPR001005 -
Lan9g1181 313 ProSiteProfiles SANT domain profile. 26 74 IPR017884 -
Lan9g1181 313 SUPERFAMILY Homeodomain-like 26 80 IPR009057 -
Lan9g1181 313 CDD SANT 137 182 IPR001005 -
Lan9g1181 313 SMART sant 25 77 IPR001005 -
Lan9g1181 313 SMART sant 134 184 IPR001005 -
Lan9g1181 313 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 133 185 IPR006447 GO:0003677
Lan9g1181 313 ProSiteProfiles SANT domain profile. 138 186 IPR017884 -
Lan9g1181 313 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 288 IPR043363 -
Lan9g1181 313 CDD SANT 28 74 IPR001005 -
Lan9g1181 313 Gene3D - 21 88 - -
Lan9g1181 313 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 130 186 IPR017930 -
Lan9g1181 313 Pfam Myb-like DNA-binding domain 137 182 IPR001005 -
Lan9g1181 313 Pfam Myb-like DNA-binding domain 26 72 IPR001005 -
Lan9g1181 313 ProSiteProfiles Myb-like domain profile. 21 75 IPR001005 -
Lan9g1181 313 MobiDBLite consensus disorder prediction 207 235 - -
Lan9g1181 313 PANTHER MYB TRANSCRIPTION FACTOR MYB51 1 288 - -
Lan9g1181 313 SUPERFAMILY Homeodomain-like 132 185 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1181 Lan-Chr9 19192391 19194979 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan9g1181 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1181 - - gmx:778181 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0397 11 2897628 2900469 Lan9g1181 9 19192391 19194979 LSH