Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1168 ATGGGGTTGTATCAAGCACGTGGGAATGAGGTGCCAGTGTTGTCTCTGAATTCACTGCCATTAGGGATTCGATTTCGACCAACGGATGAGGAACTTATTGATTATTATTTGCGTCAGAAAATCAATGGCAATGGTGATCTTGTTTGGGTTATTCGTGAAATTGATGTTTGCAAATGGGAGCCTTGGGATTTGCCTGATTTGTCAATGTTGCGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACAGGACCGCAAATATCCGAATGGCCATCGGTTGAACCGGGCAACAACTCATGGATATTGGAAGGCAACGGGCAAGGATCGCAAAATTAAGTCCGGCTCCACCTTGATTGGAATGAAGAAGACTCTAGTTTTTCATACCGGTCGCGCTCCTAAAGGGAAGAGAACCAATTGGGTTATGCATGAGTACAGACCTACCCTAATGGAGCTCGATGGTACCAATCCTGGACAGAATCCGTATGTCATTTGCCGACTATTTAAGAAACAGGACGAGAGTCTTGAAGTTTCAAAGTGTGATGAAGTGGAGCAGGCTGCTTCAACTCCTATGACTGCCAATCACACTCCGGAAGAAATGCAATCTGATCCAGCAATGGTTCCAGTATCTTCTTCACAGGGTACTGAATATGATAAGCTGCTAGCAGTTGATAAGAACTCGGAGGAAGCAATATGCAATGTTATAACCTCGGTCGATTCCCATGGTGACATATGTGATGTTTATAGTGCACAAAATCAAATTGCAGAACCACCTGCAGAGGCTGTTCAGCCATTGAACGAAAACTTACTTTATCCGGCACTTGAGTGTTTGGATGACAAAGTGATCTCCCCTGTCCATGTGCATATTCCTCCAGAATTTTATTATCAGGCAAACAAGGAATCAGATGCCAGTTCTTGGCTGCAACTTCAGAATGACACAAATGAGATAGATATTACAGACTATTTCGACTCGATTATTGATGACTTCTGCATCGAGGAGTCTACAGGCCAAAATCCAAGCCCTACCTTGTTTAATCTTAAGGACAACGAATCATGCATTAAATCAGATGCGCAAATGGCAAATTCGAATCATATGCAAGCTTTTGATGCTGCTTATCCTGAGGAGGCAATCAATAGAAACACTCCTCTGTTGGCGAGCGACGAATTTTTCAATGACATTGCCTCTGACCTCAGTGGCAATGAGCAGAAAAGCAACACAAGGTTCTCGCAAATCTATTCTGAGGTGTTCTCAATTGATGCTGGTATGGACGAAGTGTACAATGGGGTGAATGATTATGAGCAAGCAACAAGCCTTAACACGGTTGTTAATGGGGATACTGGAATCATCAGAGGGACTCAACTAGTACAAAACGAACTGCCAAACATCAACACCATGGGGCAATCGGAAGGATTTGTTATGCATCGGCAGAGTTGTTCCAATGAGGCAGCAAAAGTTGGATCAAATTCAACCATTGCTGGGGAGGGCGAAGCTTCAGGAAACCATGTTGCTGGTGAGAGCACAATTGTTACAGATGATGCGGATGAACTCGAAATACCATCTCCTATGTCCTTTGATGCGGGAATGCTTTTCGTCTCTAAGAGACAAGTTGATTCTGAAGACTCCCCGAGATCAGAAGACTCCCCGAGATCAGAAGACTCCCTGAGACCAGAAGACCTCACATCGAAAAGAAGTGACAGTTACTTACCAAAAGCTTCCTCCAATCTAAACATGTGGTCTTCTTCTGTTATTACAGTTTCAGCAGTTGTGCTTGTCTTACTAGTATTCCTAGCTAATATATTGGGATATCTTCAATTTTAA 1815 0.4347 MGLYQARGNEVPVLSLNSLPLGIRFRPTDEELIDYYLRQKINGNGDLVWVIREIDVCKWEPWDLPDLSMLRNKDPEWFFFCPQDRKYPNGHRLNRATTHGYWKATGKDRKIKSGSTLIGMKKTLVFHTGRAPKGKRTNWVMHEYRPTLMELDGTNPGQNPYVICRLFKKQDESLEVSKCDEVEQAASTPMTANHTPEEMQSDPAMVPVSSSQGTEYDKLLAVDKNSEEAICNVITSVDSHGDICDVYSAQNQIAEPPAEAVQPLNENLLYPALECLDDKVISPVHVHIPPEFYYQANKESDASSWLQLQNDTNEIDITDYFDSIIDDFCIEESTGQNPSPTLFNLKDNESCIKSDAQMANSNHMQAFDAAYPEEAINRNTPLLASDEFFNDIASDLSGNEQKSNTRFSQIYSEVFSIDAGMDEVYNGVNDYEQATSLNTVVNGDTGIIRGTQLVQNELPNINTMGQSEGFVMHRQSCSNEAAKVGSNSTIAGEGEASGNHVAGESTIVTDDADELEIPSPMSFDAGMLFVSKRQVDSEDSPRSEDSPRSEDSLRPEDLTSKRSDSYLPKASSNLNMWSSSVITVSAVVLVLLVFLANILGYLQF* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1168 604 MobiDBLite consensus disorder prediction 183 210 - -
Lan9g1168 604 Gene3D NAC domain 28 173 IPR036093 GO:0003677|GO:0006355
Lan9g1168 604 SUPERFAMILY NAC domain 14 169 IPR036093 GO:0003677|GO:0006355
Lan9g1168 604 MobiDBLite consensus disorder prediction 535 563 - -
Lan9g1168 604 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Lan9g1168 604 MobiDBLite consensus disorder prediction 184 210 - -
Lan9g1168 604 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 14 449 - -
Lan9g1168 604 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 14 449 - -
Lan9g1168 604 MobiDBLite consensus disorder prediction 533 565 - -
Lan9g1168 604 MobiDBLite consensus disorder prediction 483 504 - -
Lan9g1168 604 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1168 Lan-Chr9 19107534 19110788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1168 13 325 NAC Transcription Factor Family AT3G49530 50.305 7.00e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan9g1168 NAM 5.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1168 - - lang:109356058 1197.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0409 11 2994186 2997950 Lan9g1168 9 19107534 19110788 LSH
Lan9g1168 9 19107534 19110788 Lan15g0583 15 13217545 13221215 PCT
Lan9g1168 9 19107534 19110788 Lan3g0774 3 14430821 14436813 PCT
Lan15g0583 15 13217545 13221215 Lan9g1168 9 19107534 19110788 PCT
Lan3g0774 3 14430821 14436813 Lan9g1168 9 19107534 19110788 PCT