Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1154 ATGTCTCCGCCGCAGCTAGGCATAGGGGATGATGAAGGTGAAAGCAATGTAACTTTGTTGGTTTCTTCCTCAACAACCATGGAAAGTGTGTGTCTTAATGGCTCAAAATTAAAAGAGTTCAACTACATGGGGTTATCCGATTCTTCTTCGGTGGATAGTTCAGTTCCGTCATTCTCATCACCGGATGAGAATAAAAGTAATCTGAATTTAAAAGCTACTGAGCTCAGATTGGGGCTTCCAGGATCTCAGTCTCCTGAAAGAGATTCAGATCTTTGCTTGAGAAGTTCAACTCAATTTGATGAAAAGCCGCTGTTTCCTTTGCGTCCTGCGGTCGATGATCATCATCCGTCGTCAAAGCCTGCTGTTTTGGGTAACAAAAGAGGGTTCTCAGATGCCATGAATGAGTTCCCAGAGGGAAAATTGATCGTTAGTTCGGATGCGAACACAATATTGTCATCTAGGCCTTCTCTTGGTGTGGGGTTAAAACCCTGCTCTATGCTTGACAATGTTGGGGCTCAGCAAGCCAAAGCCAAAGAAGTAGCAACAACGAAGGCTACTGAAAGCAGACCGATTCCTAATGGTTCGGCAAATAATAATAGCAGTGCACCTGCTACCAAGGCACAGGTTGTAGGTTGGCCTCCTATAAGATCATTCAGGAAAAATTCATTGGCTACTACTTCAAAGAACATTGTTGAAGTAGATGGAAAAGTAGGGTCCGGTACACTCTTTGTGAAGGTCAGTATGGATGGTGCTCCTTATTTAAGAAAAGTGGACTTGAAGAATTACTCGGAATATCCAGAACTATCTTCTGCTCTCGAGAAGATGTTCACCTGTTTTACAATAGGGCGATGTGGATCTCATGGAAATCTGAATGAAACCAAGCTGAAGGATCAGCTTCACGGGTCAGAATATGTTCTTAGCTATGAGGATAAAGATGGTGACTGGATGCTTGTGGGTGATGTTCCTTGGGAGATGTTTATTGATACATGCCGGAGGCTGAGGATCATGAAGACTTCTGATGCCATTGGTCTAGCACCCAGAGCTTTTGAAAAAAAGTAA 1059 0.4334 MSPPQLGIGDDEGESNVTLLVSSSTTMESVCLNGSKLKEFNYMGLSDSSSVDSSVPSFSSPDENKSNLNLKATELRLGLPGSQSPERDSDLCLRSSTQFDEKPLFPLRPAVDDHHPSSKPAVLGNKRGFSDAMNEFPEGKLIVSSDANTILSSRPSLGVGLKPCSMLDNVGAQQAKAKEVATTKATESRPIPNGSANNNSSAPATKAQVVGWPPIRSFRKNSLATTSKNIVEVDGKVGSGTLFVKVSMDGAPYLRKVDLKNYSEYPELSSALEKMFTCFTIGRCGSHGNLNETKLKDQLHGSEYVLSYEDKDGDWMLVGDVPWEMFIDTCRRLRIMKTSDAIGLAPRAFEKK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1154 352 MobiDBLite consensus disorder prediction 107 126 - -
Lan9g1154 352 Gene3D - 236 349 - -
Lan9g1154 352 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 22 348 IPR003311 GO:0005634|GO:0006355
Lan9g1154 352 MobiDBLite consensus disorder prediction 186 206 - -
Lan9g1154 352 PANTHER AUXIN-INDUCED PROTEIN 22 348 - -
Lan9g1154 352 MobiDBLite consensus disorder prediction 46 69 - -
Lan9g1154 352 MobiDBLite consensus disorder prediction 178 207 - -
Lan9g1154 352 SUPERFAMILY CAD & PB1 domains 239 337 - -
Lan9g1154 352 Pfam AUX/IAA family 73 347 IPR033389 -
Lan9g1154 352 ProSiteProfiles PB1 domain profile. 241 338 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1154 Lan-Chr9 18932387 18936767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1154 255 338 B3 DNA Binding Superfamily AT1G19220 33.333 8.73e-08 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lan9g1154 AUX_IAA 1.9e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1154 K14484 - gmx:100815447 520.39