Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1153 ATGGAGAAGAACCAATCCTTCTCTTCCAATTCCCGCGACACCTCTCCCACTTCACGCGATGCTGTCATCGACAACAACAACCACCACCCCTTCGATCAACCTCATTCCTACAAGGTCAAATTCATCTGCTGCTATGGCGGTAAAATCCAACCGCGCCCTCACGATAACCACCTCTCCTATCTCGGCGGCGATACCAAAATCCTCGCCGTCGATCGCAACATCAATTTCTCCGCGTTCATGTCGAAGCTCTCTTCCCTCGCCAACAATGCTAACATTTGCTTCAAGTACCAACTCCCCGGCGAGGACCTCGACGCTCTCATCTCCGTCACCGATAACGAAGATCTCGACCACATGATGGTTGAGTACGATCGTTTATCACGCGCTTCTCCAACCAAACCTGCTAGAATGAAACTCATACTGTTTCCTCTAATCAACAACGCTGTTTCGGTTTCTGTTTCTTCTCCGTTCCAGAATTCGGATTTTCTGTTCGTTGACGCGCTCAATTCTGTTCAGATTCCACATCTGGAACGTTCTTCTCCGTCGCTGAATCCGGATTTTCTGTTCGGGTTCGATAATGTGCATCCAAAACCGCCAGACCCGGCGTCAGATCCGACGGTTCCGGATTTCACGGTTGAAGAACCTAATGCTGTTGTTGCTGGTGCTCAGAACCAGATCCAAGAAGAGTTACAGAAATTGAAGATTGTGAATAACAACAATGAGCAACAACTACTTCTTCATCAGTTGAAAATCAGCGAAGAAAACAGCAATGTTAACGGCGTGGACTGCTACGGTCAAAAGACTCCTGAAAAGGTGACGCCGTTAACGGCGAATTCTCCTAATTCTATTGTTCAGGTTCATGCGCCTTTTTTGCCAGATGGCGGTTTTACTGAACCGGGTCCGGTTTATCTTATTCAAACCGCGTCAGGGTTATACCAAGCGGTTCGACCCGTCACTGTGGGGCCTACTTACTATGCTATGCCGAGGATGGTTCCAGCTCCTGATTCTGGTGAAATGTACAATACGGCGTCGCTTTCGCATTCAGCGTCGAATATTGCTGCTTCTGCTGCTGCTGCTTACAATGGTGATTCACAGGTTGGGGTTCCGCACTTGCCTGAAAGGTCTATTGTTTGGAATTGA 1137 0.4837 MEKNQSFSSNSRDTSPTSRDAVIDNNNHHPFDQPHSYKVKFICCYGGKIQPRPHDNHLSYLGGDTKILAVDRNINFSAFMSKLSSLANNANICFKYQLPGEDLDALISVTDNEDLDHMMVEYDRLSRASPTKPARMKLILFPLINNAVSVSVSSPFQNSDFLFVDALNSVQIPHLERSSPSLNPDFLFGFDNVHPKPPDPASDPTVPDFTVEEPNAVVAGAQNQIQEELQKLKIVNNNNEQQLLLHQLKISEENSNVNGVDCYGQKTPEKVTPLTANSPNSIVQVHAPFLPDGGFTEPGPVYLIQTASGLYQAVRPVTVGPTYYAMPRMVPAPDSGEMYNTASLSHSASNIAASAAAAYNGDSQVGVPHLPERSIVWN* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1153 378 Pfam PB1 domain 56 142 IPR000270 GO:0005515
Lan9g1153 378 PANTHER OS05G0427100 PROTEIN-RELATED 4 344 - -
Lan9g1153 378 MobiDBLite consensus disorder prediction 1 31 - -
Lan9g1153 378 Gene3D - 59 141 - -
Lan9g1153 378 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P 4 344 - -
Lan9g1153 378 Coils Coil 218 242 - -
Lan9g1153 378 SUPERFAMILY CAD & PB1 domains 54 142 - -
Lan9g1153 378 CDD PB1_UP2 42 141 - -
Lan9g1153 378 SMART PB1_new 53 143 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1153 Lan-Chr9 18928809 18930358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1153 32 265 MAP Kinase Kinase Kinase AT5G57610 31.933 9.38e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1153 - - lang:109338577 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0962 2 20597901 20599561 Lan9g1153 9 18928809 18930358 LSH