Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1149 ATGGTACAGGAAAACTTGCTCTTCAGTTTCACCCTCATTCTCACGCACACATTCAATTCCCCTTTCAATTCAAATCAAATTCAAACTCTAGCTAGGGTTAGCTTTTCGAATTCCACTCTATTTCTCCTTGTAAATGCTTCGGAACCTCTGAATTCCATCATTGAACCAACAATGTACGGTCACGCCCCACCAACGAACATGGACAACCAAATCGGTGCTGACGAAAACGTCGACGGATCTGGCGAGCACTCTATGGATCACATTCAGTATGAAACGCATGCCCTTGATGATGGTAACGGTGCAATTGGTGGGGGCGTTGAAGATATTGCTGCTGCTGATGTATATGTCTCCGGTGACGGTGGTGGTGGGGACCACGACTTTGCTGTTCAACCCTGCGATGGGTCTAACCAGCTAACACTGTCGTTTCGTGGCCAAGTTTATGTTTTTGATTCTGTTACACCTGATAAGGTTCAAGCGGTATTCTTACTGTTGGGTGGTTGTGAATTGCCTTGCCCGGATACAGCACCTCAACATGATCAACGGCAAGCTCCATTGGAATATCCTGCAAGGTGTAGTCAACCACAGAGGGCAGCGTCATTAAGCAGGTTTCGGAGGAAGAAGAGAGAGCGATGCTTTGAGAAGAAAATTAGATATGAAGTACGCCAAGAAGTTGCTTGCAGGATGGACCGTAAAAAGGGCCAGTTTACTTCGTCTAAGAAACAAGATGGAGCTAGTAGTCTGGGTGCTGGCCAGGAGTCAGGGCAGGATGATAGTCCATCAGAAACTGCGTGCACACATTGTGGCATTAGTTCAAAATCCACCCCAATGATGCGGCGAGGGCCAAATGGACCAAGGTCACTATGCAACGCTTGCGGACTTTTTTGGGCAAATAGGGGTGCTTTGAGAGACCTGTCTAAGAGAAACCAGGAAATCTCTCTTGTACCAGCTCAGCAGGTTGAAGGTAATAATAACTCAGACTGTGGGACTGCCATCCATGCACATAACAATCTTGTTACTTTCTCCGGTAACGATAACCCAGATTTGGTACCTGGTCGCTGA 1059 0.4703 MVQENLLFSFTLILTHTFNSPFNSNQIQTLARVSFSNSTLFLLVNASEPLNSIIEPTMYGHAPPTNMDNQIGADENVDGSGEHSMDHIQYETHALDDGNGAIGGGVEDIAAADVYVSGDGGGGDHDFAVQPCDGSNQLTLSFRGQVYVFDSVTPDKVQAVFLLLGGCELPCPDTAPQHDQRQAPLEYPARCSQPQRAASLSRFRRKKRERCFEKKIRYEVRQEVACRMDRKKGQFTSSKKQDGASSLGAGQESGQDDSPSETACTHCGISSKSTPMMRRGPNGPRSLCNACGLFWANRGALRDLSKRNQEISLVPAQQVEGNNNSDCGTAIHAHNNLVTFSGNDNPDLVPGR* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1149 352 MobiDBLite consensus disorder prediction 238 277 - -
Lan9g1149 352 MobiDBLite consensus disorder prediction 231 278 - -
Lan9g1149 352 SMART tify_2 131 166 IPR010399 -
Lan9g1149 352 PANTHER GATA TRANSCRIPTION FACTOR 28 74 331 IPR045280 GO:0006355
Lan9g1149 352 Pfam CCT motif 196 238 IPR010402 GO:0005515
Lan9g1149 352 ProSiteProfiles CCT domain profile. 196 238 IPR010402 GO:0005515
Lan9g1149 352 PANTHER GATA TRANSCRIPTION FACTOR 25 74 331 - -
Lan9g1149 352 SMART GATA_3 258 311 IPR000679 GO:0006355|GO:0043565
Lan9g1149 352 CDD ZnF_GATA 263 309 IPR000679 GO:0006355|GO:0043565
Lan9g1149 352 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 260 319 - -
Lan9g1149 352 Pfam tify domain 134 165 IPR010399 -
Lan9g1149 352 ProSiteProfiles Tify domain profile. 131 166 IPR010399 -
Lan9g1149 352 ProSiteProfiles GATA-type zinc finger domain profile. 258 317 IPR000679 GO:0006355|GO:0043565
Lan9g1149 352 Pfam GATA zinc finger 264 299 IPR000679 GO:0006355|GO:0043565
Lan9g1149 352 Gene3D - 255 314 IPR013088 GO:0006355|GO:0008270
Lan9g1149 352 ProSitePatterns GATA-type zinc finger domain. 264 291 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1149 Lan-Chr9 18880346 18884961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1149 68 349 Tify Gene Family AT4G24470 46.885 7.73e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Lan9g1149 CCT 1.1e-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1149 - - lang:109356321 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g1149 9 18880346 18884961 Lan3g1540 3 26863830 26869040 PCT