Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1138 ATGCAGCACCCATCGAGACCCGAAGCGGAACACTTGTTAGGTATGGCTGAGAAGCTTTTACAAACACGAGATCTCAACGGTTCTCGTGAATTCGCTCTTCTCGCTCAAGAATCTGAGCCTCTTCTAGAAGGCCCTGACCAGATCTTAGCTATAGTTGATGTACTTGTTGCATCTGAGAAGCGCGTGAACAACCACCCTGATTGGTACGCGCTTCTCGGCGTCGATCGACGCACCGATGATATTGAAGCGATGAAGCGCCAGTATCGCCGCCTCGCTCTCCTCCTTCACCCTGACAAGTCGCGTTTCACCTTCGCCGACCACGCGTTCAACCTCGTGGCTGACGCGTGGGCTGTACTCTCTGACCCAATTAAAAAAGCACAATTTGATAGGGAGTTGTCTTACTTCACCCGTGTTGATCTCTCTGCCCCGGCCCAAGCCCAGGCCCAAACCCAGGCTCCTAGCTGGGTTCAGCAGGATAAGTTGCCGGTGCGTAGAACCGGGCCTGGGCTTGGCTCTGGCTCGGGCGTCCGAAACAATGTTCCTCCTCAGGGGTTTGACTTTGATCCGCGGAACAACAACGCTTCTGCCTCCGCCGTCAGGAGTGAGGTTGCGGCGGAGGAGAGTTCGCGGCGAAAGTCGGCGACGTTCTGGACTGCTTGCCCTTACTGTTACCGGCTCTATGAGTATCCTAGGGTTTATGAGGGTTGTGTGTTATTGTGCCAGAATTGCGAGAGGTCGATTCATGGAATTGAAGTTAAGTCTCTTCCCCCCCTTGTGCCGGGGCAAGATGCGTATTACTGCTGCTGGGGATTTTTCCCTATGGGGTTTGTTCTCGGAAATATCGAATCTGGTGAAAAGGAGAAAAATGCTGTGCCTGAGCCTGTGCCACTGCAGCAGCCTGCGGCGACAGTGCTGCCCAATTGGATGCCTGCGCCGACTGCGTCATTGCCTCAGCCCACACAGAATGGTGGAAACAATGCTCAACCTGCAGCGGGGAATCCGAGGGTAACAAGGGCAGCTGCTCCGACTGGTGTTCAGAATGGGGCTCCTTCACGGGGAGGTACTCCAAAGAAGCGAGGAAGGCCACGGAAGTATCCTCGTGATTGA 1107 0.5474 MQHPSRPEAEHLLGMAEKLLQTRDLNGSREFALLAQESEPLLEGPDQILAIVDVLVASEKRVNNHPDWYALLGVDRRTDDIEAMKRQYRRLALLLHPDKSRFTFADHAFNLVADAWAVLSDPIKKAQFDRELSYFTRVDLSAPAQAQAQTQAPSWVQQDKLPVRRTGPGLGSGSGVRNNVPPQGFDFDPRNNNASASAVRSEVAAEESSRRKSATFWTACPYCYRLYEYPRVYEGCVLLCQNCERSIHGIEVKSLPPLVPGQDAYYCCWGFFPMGFVLGNIESGEKEKNAVPEPVPLQQPAATVLPNWMPAPTASLPQPTQNGGNNAQPAAGNPRVTRAAAPTGVQNGAPSRGGTPKKRGRPRKYPRD* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1138 368 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 364 - -
Lan9g1138 368 Pfam DnaJ domain 67 129 IPR001623 -
Lan9g1138 368 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Lan9g1138 368 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 3 364 - -
Lan9g1138 368 MobiDBLite consensus disorder prediction 172 191 - -
Lan9g1138 368 MobiDBLite consensus disorder prediction 149 191 - -
Lan9g1138 368 MobiDBLite consensus disorder prediction 307 368 - -
Lan9g1138 368 MobiDBLite consensus disorder prediction 314 332 - -
Lan9g1138 368 SMART dnaj_3 66 124 IPR001623 -
Lan9g1138 368 CDD DnaJ 67 121 IPR001623 -
Lan9g1138 368 Gene3D DnaJ domain 55 150 IPR036869 -
Lan9g1138 368 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Lan9g1138 368 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Lan9g1138 368 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lan9g1138 368 PRINTS DnaJ domain signature 88 103 IPR001623 -
Lan9g1138 368 PRINTS DnaJ domain signature 104 124 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1138 Lan-Chr9 18760557 18762161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1138 8 276 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.416 9.83e-56 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1138 - - gmx:100816918 420.624