Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1137 ATGGCAGAAAATTTGGAAACACCTGAAATGTTCTCCAAGCTTATTCTTCAACAACAACAATATCAATCTCAATCTAACACTCACCCTTTCCAACTCTCCAATGAATGCAGAACCTCAGAAGATGATGATAGCCATAGCAGCGGTGGGCCCATTCAAAAGCCCGCCTCTTCCACAGAAGGAGCTACTATAGAAGTCACGCGTAGGCCCAGAGGCCGTCCTCCGGGCTCTAAAAACAAGCCCAAGCCGCCAATCATGTTACTTCAAGAGTCCGGGCCCGTGATGAGCCCGTACACATTTGAAATTCAGAGCGGAAACGACGTCGTTGAGTCCTTAAGGCGCTTCAGCATTCGAAACAACACGGGCTTATGTATTGTAAACTGTAGTGGAACCGTTGTTAATATCAATCTTCGTCAACCTTCTCCTGATGAATCAGGAATCACTGTTCATTTTCAAGGATGCTTTGAAATTGTGTCACTATCCGCAATCATATTCCCTCATTCTTGGGCGCCGGTGGTTCCGAATGAATTTTCTATTACTGTCGCCGGACTTGACGGCCGGATTGCTGGAGGATTCGTCGTCGGACGGTTAATTGCCGCCGGTACGGTGTACGTCGTTGCCGCTTCGTTTAATAATCAGTCTTATCACAGGCTTCCATCCGAAGAGGAAGTGAGAATCAATAACTCCGTTTACGGTGTCGGGGATGTGTTGTCGCTGCCGGTGTCTGGTGGCGCGGATGTGATTTGGGATCCAACGGCAAGACCACCACCACCACCTTTCTGA 780 0.4846 MAENLETPEMFSKLILQQQQYQSQSNTHPFQLSNECRTSEDDDSHSSGGPIQKPASSTEGATIEVTRRPRGRPPGSKNKPKPPIMLLQESGPVMSPYTFEIQSGNDVVESLRRFSIRNNTGLCIVNCSGTVVNINLRQPSPDESGITVHFQGCFEIVSLSAIIFPHSWAPVVPNEFSITVAGLDGRIAGGFVVGRLIAAGTVYVVAASFNNQSYHRLPSEEEVRINNSVYGVGDVLSLPVSGGADVIWDPTARPPPPPF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1137 259 MobiDBLite consensus disorder prediction 18 34 - -
Lan9g1137 259 PIRSF ESCAROLA 10 235 IPR014476 GO:0003680
Lan9g1137 259 Gene3D - 96 229 - -
Lan9g1137 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 19 230 IPR014476 GO:0003680
Lan9g1137 259 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 221 - -
Lan9g1137 259 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 211 IPR005175 -
Lan9g1137 259 MobiDBLite consensus disorder prediction 49 63 - -
Lan9g1137 259 CDD DUF296 96 209 IPR005175 -
Lan9g1137 259 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 19 230 - -
Lan9g1137 259 ProSiteProfiles PPC domain profile profile. 91 231 IPR005175 -
Lan9g1137 259 MobiDBLite consensus disorder prediction 18 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1137 Lan-Chr9 18739229 18740228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1137 9 257 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 46.290 2.30e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1137 - - gmx:100811053 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0950 2 20464768 20465864 Lan9g1137 9 18739229 18740228 LSH
Lan11g0440 11 3236695 3237892 Lan9g1137 9 18739229 18740228 LSH
Lan9g1137 9 18739229 18740228 Lan15g0558 15 12863003 12864962 PCT
Lan9g1137 9 18739229 18740228 Lan3g0758 3 14165037 14167165 PCT