Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1129 ATGGAATTTGAGGAGCAAGAAGAGCAAGAGGAGGAAATGGGAATTCCTGAGCCACCAAGTTATGACTCGTTCGGAAACATGTCCAAACTCGGCGGTGCTGTTGGAACTGAGGGAGCTGCAACCACCATAGGGCGCAAAAGTGGGACCATCAAATACAAAGAATGTCAAAAGAACCATGCTGTCAGTTTCGGTGGCCACGCCGTTGACGGCTGCTGTGAGTTCATCGGTGCCGGGGAAGAAGGCACGCTGGAGGCAGTTATCTGCGCTGCCTGTAACTGCCACCGGAATTTCCACCGCAAGGAGATTGACGGCGAATTTAGCCCCTATAACCGTCCTCAACCACCGCCGCCTCCGCCGCAGATGCATCACCACCACCAAATCTTACCATACTACCACCGCGGGCCAACGTACCCCGCCGCCTCCGGATACCTGCACCACCATCTTGTCTCTCCAATGTCACAGCACCGTCCGTTGGCTCTTCCAGCGGCGGCGGCGGCATCAGGAGGGGGAATGAGTAGGGAAGAGGAGGACATGTCAATTCCTAGCAGCAGCGGCGGCGGTGGAACGAGGAAGAGGTTTAGGACGAAGTTCACGCAGGAACAGAAGGAGAAGATGCTGGCGTTTGCGGAACAAGTAGGGTGGAGAATCCAGAAGGATGATGAAGCTGCGGTGGAGCAGTTCTGTGTGGAGAATTGTGTGAAGAGAAATGTTCTCAAGGTTTGGATGCATAATAACAAGAACAGTCTTGGTTCGATTTGA 759 0.5402 MEFEEQEEQEEEMGIPEPPSYDSFGNMSKLGGAVGTEGAATTIGRKSGTIKYKECQKNHAVSFGGHAVDGCCEFIGAGEEGTLEAVICAACNCHRNFHRKEIDGEFSPYNRPQPPPPPPQMHHHHQILPYYHRGPTYPAASGYLHHHLVSPMSQHRPLALPAAAAASGGGMSREEEDMSIPSSSGGGGTRKRFRTKFTQEQKEKMLAFAEQVGWRIQKDDEAAVEQFCVENCVKRNVLKVWMHNNKNSLGSI* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1129 252 MobiDBLite consensus disorder prediction 109 123 - -
Lan9g1129 252 MobiDBLite consensus disorder prediction 1 15 - -
Lan9g1129 252 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 51 102 IPR006456 -
Lan9g1129 252 MobiDBLite consensus disorder prediction 166 191 - -
Lan9g1129 252 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 37 249 - -
Lan9g1129 252 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 52 101 IPR006456 -
Lan9g1129 252 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 190 247 IPR006455 -
Lan9g1129 252 Gene3D - 175 251 - -
Lan9g1129 252 Pfam ZF-HD protein dimerisation region 50 102 IPR006456 -
Lan9g1129 252 SUPERFAMILY Homeodomain-like 180 248 IPR009057 -
Lan9g1129 252 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 37 249 - -
Lan9g1129 252 MobiDBLite consensus disorder prediction 104 124 - -
Lan9g1129 252 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1129 Lan-Chr9 18654297 18655459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1129 1 249 ZF-HD Transcription Factor Family AT4G24660 51.807 3.60e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lan9g1129 ZF-HD_dimer 5.8e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1129 - - lang:109357419 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g1129 9 18654297 18655459 Lan15g0882 15 18103854 18104750 PCT
Lan9g1129 9 18654297 18655459 Lan14g0682 14 13757612 13758628 PCT
Lan15g0882 15 18103854 18104750 Lan9g1129 9 18654297 18655459 PCT
Lan14g0682 14 13757612 13758628 Lan9g1129 9 18654297 18655459 PCT