Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1126 ATGAAGAAGAAAAGAAAAGGAACTGAGAATGAGGAATCCTCGAACCTGCCCGAGGTTTTTCATTCGGATCGTGGGTCGAATTTGAAATCACATTATTCTCTGGAAGATTGTTCCAGGCTGAAGAAGAGGTGTACAGAACATGTTGACATAAAGTCAGCTTCTGCTTCCAACAAAAGTCGGGTTGCAGGTATTGCAACTGCTCCGCCTTGCGGGACTTCATCGCTGATCACACCAGGAAGAGGGCTCAAGAGAAAGATAGGTTGCATTGGTGTGGCTACCCAGATGGGCAGGAAGAAGAAGATTGGGGATGATTATGTTACCGGAGCGAGGATCGGGCAAGGGAGGTATGGATCAGTTTGGTTGTGTCAGTCCAGGGTTGGTGGTGTGCAGTATGCGTGCAAGACACTGAGGAAGGGGGAGGAGACGGTTCACCGAGAGGTCGAGATAATGCAGCACTTGTCTGGGCATCCTGGGGTTGTGACTCTGCACGCTGTGTATGAAGAAGCTGACTGCTTTCATCTCGTGATGGAATTGTGCTCTGGTGGGCGATTGATTGATCAGATGTTTAAAGAGGGCCCATGTTCAGAACACCGAGCAGCCAATATACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCACGATATGGGAGTTGTCCACAGAGATATCAAACCTGAGAATATTCTGCTCACAGCATTGGGGAAAATAAAGCTTGCAGATTTTGGCCTGGCCATGAGAATTTCCGAGGGTCAGAACTTGACGGGTCTGGCTGGAAGCCCTGCATATGTTGCTCCAGAAGTATTGTCGGGCAAATATTCTGAGAAGGTGGATATATGGAGTTCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTAAAGGAGATTCGTTGGACGCAGTTTTTGAGGCTATTAAGAATGTCAACCTAGATTTCCAAACAGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATGTTTCAGCAAGGATAACAGCTGATGAAGTACTTAGGCATCCATGGATATTGTTATACACAGAGAGTACACCAAAGATGCTGCCTGTTAAAACAAAATCGAAGCACCAAACTGGAGCTGCTTCCCACAAGTTTGCCCCTAGATTAAGAGGAAACATGATAGTTGATGGCTCCCTTGATAATTTTTCAAGCCAAGTTTCATTCTCTGAAAGTTGCAAATCAGAAGATCAGGATGATTGTGTATTCATTGATGCACTAGCCACTGCAATTTCACATGTGACAATATCTGAACCAAAGAGGAGCAAGTTGTGGGGTCCCTCAAGTCCAATAGATCAGCAAGGTTCATCTAACATGAAGGCTAACCTCTGTAAAGCATTTTGA 1389 0.4564 MKKKRKGTENEESSNLPEVFHSDRGSNLKSHYSLEDCSRLKKRCTEHVDIKSASASNKSRVAGIATAPPCGTSSLITPGRGLKRKIGCIGVATQMGRKKKIGDDYVTGARIGQGRYGSVWLCQSRVGGVQYACKTLRKGEETVHREVEIMQHLSGHPGVVTLHAVYEEADCFHLVMELCSGGRLIDQMFKEGPCSEHRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTALGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLSGKYSEKVDIWSSGVLLHALLVGSLPFKGDSLDAVFEAIKNVNLDFQTGMWESISKPARDLVGRMLTRDVSARITADEVLRHPWILLYTESTPKMLPVKTKSKHQTGAASHKFAPRLRGNMIVDGSLDNFSSQVSFSESCKSEDQDDCVFIDALATAISHVTISEPKRSKLWGPSSPIDQQGSSNMKANLCKAF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1126 462 SMART serkin_6 105 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1126 462 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 455 - -
Lan9g1126 462 Gene3D Transferase(Phosphotransferase) domain 1 96 414 - -
Lan9g1126 462 ProSiteProfiles Protein kinase domain profile. 105 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1126 462 Pfam Protein kinase domain 105 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1126 462 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Lan9g1126 462 CDD STKc_CAMK 104 352 - -
Lan9g1126 462 SUPERFAMILY Protein kinase-like (PK-like) 96 373 IPR011009 -
Lan9g1126 462 MobiDBLite consensus disorder prediction 1 24 - -
Lan9g1126 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lan9g1126 462 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 21 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1126 Lan-Chr9 18620086 18623481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1126 105 381 EF-hand Containing Proteins AT1G50700 40.767 4.49e-74 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan9g1126 Pkinase 8.9e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1126 - - gmx:100812729 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g1126 9 18620086 18623481 Lan14g0678 14 13722459 13726112 PCT
Lan14g0678 14 13722459 13726112 Lan9g1126 9 18620086 18623481 PCT