Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan9g1110 | ATTGCAGCCGTTACTGACATAGATACCAGTGGCATTCATGCACTTGAAGAATTATATAGAAGTCTTCAGAAACGAGGTATTCAGCTTGTTCTGGCAAATCCTGGTCCAGTAGTGATAGATAAGCTCCACACATCAAACTTTGCTACTTTGCTTGGTGAAGATAAAATTTTCCTCACTGTTGCTGAGGCTGTTGAATACTGTTCTCCAAAGCTGGCTGAAGACCCATGA | 228 | 0.4167 | IAAVTDIDTSGIHALEELYRSLQKRGIQLVLANPGPVVIDKLHTSNFATLLGEDKIFLTVAEAVEYCSPKLAEDP* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan9g1110 | 75 | CDD | STAS_SulP_like_sulfate_transporter | 3 | 60 | - | - | |
| Lan9g1110 | 75 | ProSiteProfiles | STAS domain profile. | 1 | 67 | IPR002645 | - | |
| Lan9g1110 | 75 | SUPERFAMILY | SpoIIaa-like | 2 | 68 | IPR036513 | - | |
| Lan9g1110 | 75 | PANTHER | HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 | 2 | 75 | - | - | |
| Lan9g1110 | 75 | PANTHER | SULFATE TRANSPORTER | 2 | 75 | IPR001902 | GO:0015301|GO:0016020|GO:0055085 | |
| Lan9g1110 | 75 | Pfam | STAS domain | 2 | 63 | IPR002645 | - | |
| Lan9g1110 | 75 | Gene3D | STAS domain | 1 | 72 | IPR036513 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan9g1110 | Lan-Chr9 | 18468150 | 18468715 | Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan9g1110 | 1 | 74 | Inorganic Solute Cotransporters | AT1G22150 | 75.676 | 1.48e-33 | 118 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan9g1110 | K17470 | - | lang:109356316 | 149.443 |