Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1108 ATGTCTTCAATGGATCATCAAGGTGATGAAAATCGTGAAACAAAAGAGATGGATGAGAGAAGTTTGTCAATGTCACATGGGCAAGAACCAAATGTGCACAGAGTGGGAGTTCCTCCAAAACAAAACATCTTCAAGGAATTCCAAGCTACTGTAAAAGAAACATTCTTCTCCGATGATCCTTTACGCTCCTTCAAGGATCAAACTAAGTCCCGGAAGCTCATCCTTGGCATTGAAGCCATGTTCCCCATACTTAGTTGGGGGAGAAATTACACGCTTAAGAATTTTAGAGGAGATCTTATAGCTGGTTTAACTATTGCAAGTCTCTGCATTCCTCAGGACATTGGATATGCAAAACTTGCAAATTTGGATCCACAGTATGGACTGTACTCTAGCTTTGTTCCGCCACTGATTTATGCTGTCATGGGTAGTTCTCGTGATATTGCAATTGGACCGGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTTCAGAATGAGATTGATCCTGTTGCAAATCCAAGAGATTACCGGCGACTTGCTTTTACTGCCACCTTTTTCGCTGGGATTACTCAAGCAACTCTTGGAGTTTTTAGGTTAGGATTTTTGATTGATTTCCTATCCCATGCTGCAATTGTTGGTTTTATGGGTGGAGCTGCTATCACAATTGCCCTTCAACAACTTAAGGGATTCCTTGGGATTAAAAAGTTTACAAAGAAAACTGATGTTATCTCTGTGATGCAATCAGTATTTTCATCAGCCCAACATGGATGGAACTGGCAAACTATAGTAATTGGAGCTAGCTTTCTGACTTTTCTTCTGTTTGCCAGATATATTGGGAAGAAGAACAAGAAATTGTTCTGGGTGCCAGCAATCGCCCCATTGATATCGGTTATACTCTCGACTACTCTTGTATACATAACTCGTGCAGACAAGGAAGGTGTTGCAATTATAAAACACATAGAGAAAGGGATCAATCCTTCTTCTGTGAAGGAAATTTATTGGAGCGGTGATTACCTCGGCAAAGGTTTTAGAATTGGCATCGTGGCTGGCATGATAGCATTGACTGAAGCCGTAGCAATTGGAAGAACATTTGCTTCTACGAAGGACTATCAACTCGATGGAAACAGAGAAATGGTGGCATTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGTTATGTAGCAACTGGTTCATTCTCTCGATCGGCCGTAAATTTCATGGCTGGCTGTGAAACTGCAGTCTCCAATATTGTCATGTCCATTGTTGTGTTCTTAACCCTGCAATTCATCACCCCTCTTTTCAAATACACTCCAAATGCTATTCTTTCTGCTATCATCATTTCTGCTGTCATCAACCTTGTCGACTATCAGGCAGCAATTTTGATATGGAAGATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTCGGGGTCTTTTTTGCCTCGGTTGAGATTGGACTTCTAATCGCTGTCTCTATATCCTTTGCAAAGATCTTATTACAAGTCACAAGGCCGCGAACTGCTATTCTCGGAAAGATACCGATGACAACTGTCTATAGAAACATCCAACAGTATCCAGAGGCCACTAAGGTTCCTGGTGTGTTGATTATAAGAGTTGATTCTGCAATATACTTTTCCAACTCCAATTATGTTAAAGAAAGAATATTAAGATGGCTGGTGAATGAGGAAGAAGAAATAAAAGGAAACTACCAAACAAGAATCCAATTTTTGATAGTTGATATGTCACCCGTTACTGACATAGATACCAGTGGCATTCATGCACTTGAAGAATTATATAGAAGTCTTCAGAAACGAGGTATTCAGGTAATTAACCAAAGTACCAAATTATTATACATCTTTTCTAATTACAATAATTCTAAATGA 1893 0.3973 MSSMDHQGDENRETKEMDERSLSMSHGQEPNVHRVGVPPKQNIFKEFQATVKETFFSDDPLRSFKDQTKSRKLILGIEAMFPILSWGRNYTLKNFRGDLIAGLTIASLCIPQDIGYAKLANLDPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPVANPRDYRRLAFTATFFAGITQATLGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDVISVMQSVFSSAQHGWNWQTIVIGASFLTFLLFARYIGKKNKKLFWVPAIAPLISVILSTTLVYITRADKEGVAIIKHIEKGINPSSVKEIYWSGDYLGKGFRIGIVAGMIALTEAVAIGRTFASTKDYQLDGNREMVALGAMNVVGSMTSCYVATGSFSRSAVNFMAGCETAVSNIVMSIVVFLTLQFITPLFKYTPNAILSAIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVFFASVEIGLLIAVSISFAKILLQVTRPRTAILGKIPMTTVYRNIQQYPEATKVPGVLIIRVDSAIYFSNSNYVKERILRWLVNEEEEIKGNYQTRIQFLIVDMSPVTDIDTSGIHALEELYRSLQKRGIQVINQSTKLLYIFSNYNNSK* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1108 630 PANTHER SULFATE TRANSPORTER 15 613 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan9g1108 630 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 15 613 - -
Lan9g1108 630 MobiDBLite consensus disorder prediction 1 35 - -
Lan9g1108 630 CDD STAS_SulP_like_sulfate_transporter 528 613 - -
Lan9g1108 630 TIGRFAM sulP: sulfate permease 82 614 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan9g1108 630 MobiDBLite consensus disorder prediction 6 23 - -
Lan9g1108 630 Gene3D STAS domain 507 626 IPR036513 -
Lan9g1108 630 SUPERFAMILY SpoIIaa-like 529 613 IPR036513 -
Lan9g1108 630 Pfam Sulfate permease family 95 475 IPR011547 GO:0016021
Lan9g1108 630 Pfam STAS domain 528 613 IPR002645 -
Lan9g1108 630 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Lan9g1108 630 ProSiteProfiles STAS domain profile. 527 612 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1108 Lan-Chr9 18462171 18465762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1108 1 613 Inorganic Solute Cotransporters AT1G22150 77.162 0.0 943
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1108 K17470 - gmx:100797668 1062.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0914 2 19762554 19767292 Lan9g1108 9 18462171 18465762 LSH
Lan11g0480 11 3648727 3655153 Lan9g1108 9 18462171 18465762 LSH
Lan9g1108 9 18462171 18465762 Lan15g0835 15 17560244 17565722 PCT
Lan15g0835 15 17560244 17565722 Lan9g1108 9 18462171 18465762 PCT