Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1107 ATGGGTTCAGTGCATCATACTGAGGTTGTTTCCAGTATGAGAGAGCAAGGAGTCTTTAATATTGAGGACAATGGTCATTCAGAGAGGTTACAATGGGTTCTGGATTCTCCAAATCCACCACCTCTATGGATAAAGCTATTTAACTCAGTTAAAGATACCATTTTTCCTAATGGCAACAAGTTTTGCTTTTCTTCAAAGAATAAAACTTGCCAAGGTTATGTTGTTTCATTCTTGCAAAATTTATTCCCAATCCTTAGTTGGTTAAGAAATTACAAAGCCTCAAAGTTCAAAGATGATTTGTTAGCTGGTTTAACTCTTGCTAGCCTAAGCATACCTCAGAGCATAGGATATGCAAATTTAGCCAAACTTGATCCTGAATATGGCCTTTATACCAGTGTTATTCCACCTCTTATTTATGCTATGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTCTCATTGCTGTTATCCTCTCTAGTCCAGAAAGTGGAAGATCCTGTTGCTAATCCTCATGCCTATAGAAATTTTGTATTTACTGTGACCTTCTTCGCCGGAATCTTTCAAACTGCATTCGGAGTTTTCAGGTTGGGTTTTCTAGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTCATGGCTGGAGCAGCTATCATTATTGGTCTTCAGCAACTCAAGGGATTGCTTGGGATTACTCACTTCACCACAAAAACAGATGCAGTATCTGTGTTTACATCTGTTTATAAGTCACTACATCATCAAATTACTTCTGCTGAAAAATGGTGCCCTCTAAATTTTGTCCTGGGTTGTTCATTCCTGATTTTCCTTCTAATTACCCGGTTTCTTGGAAGAAGAAACAAAAAGCTTTTCTGGTTGCCTGCGATTTCGCCTCTTCTATCAGTAGTACTATCAACTTTAATTGTGTATTTGTCAAAAGCTGATAAGCATGGGGTTAATATAATAAAGCATGTGAAAGGAGGCCTTAATCCAAGTTCAGCTCACTTGTTAGAATTCCATGGTCAACATGTTGGACAAGCAGCGAAAATTGGATTAATTTGCGCGATTATCGCTCTAACTGAAGCTATAGCTGTTGGTAGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTATCAATGGGATTCATGAACATTGCAGGATCATTAAGTTCATGCTATGTGGCAACTGGTTCTTTCTCAAGGACAGCAGTGAATTTCAGTGCAGGGTGTCAAACAGCAGTATCAAATATTGTGATGGCAATTACTGTGATTGTGTCACTTGAATTATTTACAAGACTCTTATACTATACCCCTGTAGCCATACTTGCTTCTATAATTCTCTCTGCACTTCCTGGATTAATTGACATAAGTGAAGCTTGCTATATTTGGAAGGTTGACAAATTAGACTTTCTTGCATGTCTTGGTGCTTTCCTTGGTGTCTTGTTTGCATCAGTAGAGATTGGTCTTATTGTTGCAGTGACAATCTCATTTGCAAAAATTCTAATACAAGCAATTAGGCCTGGAATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCATTCTGTGATGTTACTCAATACCCTATGGCCATAAGCACTCCAGGCATCATAGTGATCCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTGTGAGAGAAAGAATTCTGAAGTGGGTTAGTGAAGATGAAGACCTTAAAGAATCTGCCAAAGGAAGGGTCCAAGCTGTAATCCTAGACATGACAAACTTGATGAATGTTGATACTTCTGGAATTCTAGCACTGGAGGAACTGCACAAGAGGTTGCTTTCACGTGGAGTAGAATTAGCTATGGTCAACCCAAGATGGCTAGTTATTCATAAGCTTAAGCTTGCACACGTTGTGGACAAAATTGGAAAACAATGGATTTTCCTTACTGTTGGAGAAGCTGTGGATGCATGTATCTCTTATAAGTTTTCTAATGCTTGA 1998 0.3884 MGSVHHTEVVSSMREQGVFNIEDNGHSERLQWVLDSPNPPPLWIKLFNSVKDTIFPNGNKFCFSSKNKTCQGYVVSFLQNLFPILSWLRNYKASKFKDDLLAGLTLASLSIPQSIGYANLAKLDPEYGLYTSVIPPLIYAMMGSSREIAIGPVAVVSLLLSSLVQKVEDPVANPHAYRNFVFTVTFFAGIFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTTKTDAVSVFTSVYKSLHHQITSAEKWCPLNFVLGCSFLIFLLITRFLGRRNKKLFWLPAISPLLSVVLSTLIVYLSKADKHGVNIIKHVKGGLNPSSAHLLEFHGQHVGQAAKIGLICAIIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLSSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVIVSLELFTRLLYYTPVAILASIILSALPGLIDISEACYIWKVDKLDFLACLGAFLGVLFASVEIGLIVAVTISFAKILIQAIRPGIEVLGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFVRERILKWVSEDEDLKESAKGRVQAVILDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHVVDKIGKQWIFLTVGEAVDACISYKFSNA* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1107 665 ProSiteProfiles STAS domain profile. 551 657 IPR002645 -
Lan9g1107 665 Pfam Sulfate permease family 96 482 IPR011547 GO:0016021
Lan9g1107 665 PANTHER SULFATE TRANSPORTER 22 664 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan9g1107 665 TIGRFAM sulP: sulfate permease 83 653 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan9g1107 665 CDD STAS_SulP_like_sulfate_transporter 535 650 - -
Lan9g1107 665 Gene3D STAS domain 514 659 IPR036513 -
Lan9g1107 665 Pfam STAS domain 535 653 IPR002645 -
Lan9g1107 665 PANTHER SLC26A/SULP TRANSPORTER-RELATED 22 664 - -
Lan9g1107 665 SUPERFAMILY SpoIIaa-like 541 657 IPR036513 -
Lan9g1107 665 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1107 Lan-Chr9 18444225 18448285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1107 26 661 Inorganic Solute Cotransporters AT5G10180 64.319 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1107 K17469 - gmx:100776591 1128.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0481 11 3677579 3681472 Lan9g1107 9 18444225 18448285 LSH
Lan9g1107 9 18444225 18448285 Lan15g0834 15 17538526 17544240 PCT
Lan9g1107 9 18444225 18448285 Lan3g1575 3 27340988 27347428 PCT
Lan15g0834 15 17538526 17544240 Lan9g1107 9 18444225 18448285 PCT
Lan3g1575 3 27340988 27347428 Lan9g1107 9 18444225 18448285 PCT