Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1100 ATGTTTATTGAACGTGATTTTGGTACGCAGGGAATGCCAGTTCCGACTGAATTTCCGGTTCCGGTGACGACCGGACCTGAGATTTCTGAACATTCTGGTCTTGTTCTTGAAATTGACTGCTTTACGCAAGCAAGAAAAGCGCTTAGCTTGCGGTGCCCTTTTGATGATAAAGATGAGAATTGGAGTCCTAGAAAAGCTACTATGCCTAGTGGGCTAGCAGCTTTTTTGAACTTTGGCTCTGATAATCGGAAGAAGCGCCGAAAGAAGTCTCATTCTAATGCCAATGCAGATAGGAAAAATATATCCAAGTGTCGAGGTCCTATCATTTGGACTGAAACTGAGGAGTACTTCAGGGATTTGGCATTGCCTGATATTGACACCTTGTTTGATGCATCGTCTTCGCCTTCTAGTTTAGTTGCTCGTGAGTGTTTTTCCATTCCGGTTGTTAAGGAAAGTGGCCCAAAGGACAATGTAGTTGTTAGTAGTGAGAATGAAAATGGGAATGATGAAAATGTAGACAGTGTGGCTGTGAAAAATGAGGATGGTTTTGTAGGAGTTGATAGTCTCAATGACAAGGTTGATAGTGTTAATGACAAGGATCAAGCTACTTATGATAATTCTGATTGTGCTGTTAGTTTAGAGTGGCTTTTAGGTTGTAGAAATAAGGTTTCTATAACTTCCGAGCGCCCTTCAAAGAAAAGGAAGGTTTTGGGTGATGATGCAGGGTTGACAAAAGTTTTAATTACTATTCCCCATGATGGGAACTTATCTTATTGTCATTATTGTGGCAGGGGAGATTCAGATTTAGAGTCTAATCGGCTAATTGTCTGTGGTTCTTGTAAAGTTGCGGTTCATAGGAAGTGCTATGGTGTGCAGGGTGATGTGGATGGTGGGTCTTGGTTGTGCTCCAGGTGCGAGCGAATGGATGATATCAGTGAAATAGCGAATCCTTGTGTGCTTTGTCCGAACAAGGGTGGTGCTTTGAAACCTATTAATATAAGTGGGGAAGGTGCTGAGTCTTTCCAGTTTGCTCACTTGTTTTGTTGCCTTTGGGCACCTGAAATTTTTGTGGATGATTTGAAGAAAATGGACCCAATTATGAATGTGAGTGGAATCGAGGAAAGCCGGAGGAAACTAGTGTGTAATGTCTGCAAGGTGAAGTCTGGTGCATGTGTTCGGTGTAGCCACGGACCCTGCCGGCTTTCTTTCCATCCTTTATGTGCAAGGGAAGCTAGACAAAGGATGGAGGTTTGGGCGAAAGATTGTTCTGATAATGTTGAGTTGCGGGCTTTTTGCTTTAAGCACTCAGATTTTCAAGAGAAGAGCAGCATCTTGCTATCAGGAGATTCTGTTGCTACTGGCAGTGAATTTTCAGATGCCAGTGTCCTTCAAGTGAGTTTTCCTGTGAACAACGAAAACAATTTAAAAAGTGGCTGCAGAAACAGAGATAACACTGGGGCAATTTCTGATGGTAGTCCTGACAAATTGAACCATAATGAACCAGAAGATGGAATTAGTCGGTTAAATGCTCATAAGGTGTTGGGATGTGATGCTGAGCAGCAATTGTATAATATTGGGATGGTGGGGAGGACCAATGAGAATGCTAGTGCATCTGATACCCTCAAATATGCACTTGTTTGGAAGAAGTTGATAGAGAGAGGAAAAATCGATGTGAAAGATGTAGCTCTGAAGATTGGCATTGCTCCTGAAGAACTAACTCCAAATATTTATGAGGCTTGCATGGACCCTGATGTGCGAACCAAAATAGTCAATTGGCTAAAAGCCCATGTATATACTAATGCATGTCATAAAGGTTTGAAAGTCAAATTCAAACCAGCCAGTTCATCCAAGGATGAAGATGGAGCCACTGATGGTTCTGATACTTCACTGATATCAGATCCAGGTTTGCTTGATCCTGTTGCTGTCATGTCAGTAGTAGCACCAAGGAGAAGAACCGCCAACAACATTAGGATTTTGAAGGATAATGAAGTGATATGCTCATCTGAGGCGGTTTCTAGTGAGAATGGGATGCCAGTGGACAAGTGCATTGTAGGTGAACCTGACTGTGGAAATCCAGGAACCTCCAATGAAGTATCCATTCCTGAAGTATCTGAAAAGAATTTAATCACGTCTCAGGATACTTTACCTGAAGTTCAAGGCTGTGCTGATGAAGTCGAACATAGCAGCTTAGCAGGATGCATTTCAGATGAAAAGTTGACTATATGTTTGTTGAAACCTTCTATGCCTTCTGAGCATTACCTTCCTGTCTGTTCTAATTCAGAAGTACCTGATTCTGGTTCCATCAGAAGGATAGAAGCAACATCTAGTTACGTTCACCCATACATCAGCAATCAATTGATTCAGCTTCATAATAGCGTGCTCTCAGAGGATATTATATGTCCAAGGAGGGATAGAAATTCTTCTTTGGTTGAATCCTTGAGGGCCAGTGGTCATTCAGGTAACCAGCATCAGCATTTATCAGGTAACCAGCATCAGTATTTAACTTGCCTTGATGATTGCAAGTCTGATCAAATGAATATGGAGCAGTTGGTTAGGGCCAGAGAAATGGGTGTTTTCAAATATTCTCCAGAAGATGAAGTGGAGGGGGAACTTATATATTTTCAGCATAGGTTATTGCAGAATGCAGTGAAACGAAGGCAGATTGCAGATAATTTAATCTTCAGTGTTGCCAAGAGTTTGCCAAAGGAGATTGATACAGCACATCAGCAAATGTGGGATGCTGTACTTGTTAATCAATACACGTGTGATCTTAGGGAAGCAAAGAAGAGGGGCAGAAAAGAGAGAAAACACAAGGAAGCACAAGCAGTTCTAGCTGCTGCAACTGCTGCTGCTGCTGCTCCTAGGGTTTCTTCTTTTCGGAAAGACTCTTTAGCAGAATCCGTGCAACAGGAGAATTTGGTAAAGTTGGATACATTAAGTGGGAGGGCTGGTGTTTGTTCTCAGCCATTGCCACGAGCCAAAGAGACACTTTCAAGACTAGCTGTGACTAGGACTTCATCAGAGAAATATTCCAATTTTAGCTTGCCGTCTTCAAATCTTTCTAAGGAGCATCCTAGATTGTGTGATGTATGCAGACAACCCGAGACATTGCCAAACTCTATCCTAGTTTGCTCTAGTTGCAAGGTTGCAGTTCACTTGGATTGCTATGGTAGTGTAAAAGAAACAACAGGTCCCTGGTACTGTGAATTATGTGGAGATTTATCATCTAGAAACTCTGGGGCATCTGCTACAAATTCCATGGAGAAGCCTTATCTTATTGCAGAGTGTGCTCTCTGTGGTGGTTCTTCTGGTGCATTTAGGAAGTCTTCTGATGGCCAATGGATTCATGCCTTTTGTGCTGAGTGGATTTTTGAGTCGACATTCAAAAGAGGACAAGTAAATGCTGTTGAAGGGGTGGAGACTGTGTTGAAGGAAGTTGATATTTGTTGCATCTGCCACAAACATGGTGTATGCATCAAGTGTAGCTTTGGCAATTGTCAAACCAAGTTCCATCCATCATGTGCTAGACGTGCTGGTTTTTACATGAATGTGAGTACTCCAGCTGGCAAGCCACATAAAAAGCCGCATCACAAGGCTTACTGTGAAAAACATGGTCCAGAGCAGAGAGCAAAGGTTGCCGCAGAAGCTCAAAAACATGGAATGGAAGAGTTAAAAAGCTTCAGGCAAATTAGGGTTGAGCTAGAGAGATTACGTCTCCTTTGCGAAAGAACTGTCAGGCGTGAAAAAATAAAGCGGGATTTGGTTCTATGCTCACAAGACTTGCTTGCCTCTAAAAGAGATCATGTTGCTAGGTCTGAGCTAGCTCAGAGATCTTTCATCCTTCCTGGTGGGAGTTCAGAATCAGCTACCACATCCCTTAAAGTGAACACAGAGGGAAACAGATCATGCAGTGAAGTAGTTCAAAGATCGGATGATATAACTGTGGACAGCTCAGTTCCTGACAAAAACCATGCCGGAGTTGCTGTATCCATGGACACTGACCCAAAATTAGACGATGACTGCTCAACCTCACCTAGCAATTATAACCACAAGATTCCAGAGAAGTTGCAATATTTTGGTAAGCAGGTTCCTCACAGGGCTTCTGCCATATCACATAAATTGGATGATGGTGGATGGAGATCAAAATCAAGAAAGTTGCAGCACGCAGAGACATTTGGAAAAGAGCTTGTTATGACGTCAGACGAAGCATCTATGAAGAACTCAATGTTACCTAAAGGGTATGCTTATGTTCCTGCTGATTGCTTGTCAAATGATGACATGCTGTCTAACCAGGACGTAGATGCTAACGGATCAGTTGAACACGATGGGTAG 4332 0.4247 MFIERDFGTQGMPVPTEFPVPVTTGPEISEHSGLVLEIDCFTQARKALSLRCPFDDKDENWSPRKATMPSGLAAFLNFGSDNRKKRRKKSHSNANADRKNISKCRGPIIWTETEEYFRDLALPDIDTLFDASSSPSSLVARECFSIPVVKESGPKDNVVVSSENENGNDENVDSVAVKNEDGFVGVDSLNDKVDSVNDKDQATYDNSDCAVSLEWLLGCRNKVSITSERPSKKRKVLGDDAGLTKVLITIPHDGNLSYCHYCGRGDSDLESNRLIVCGSCKVAVHRKCYGVQGDVDGGSWLCSRCERMDDISEIANPCVLCPNKGGALKPINISGEGAESFQFAHLFCCLWAPEIFVDDLKKMDPIMNVSGIEESRRKLVCNVCKVKSGACVRCSHGPCRLSFHPLCAREARQRMEVWAKDCSDNVELRAFCFKHSDFQEKSSILLSGDSVATGSEFSDASVLQVSFPVNNENNLKSGCRNRDNTGAISDGSPDKLNHNEPEDGISRLNAHKVLGCDAEQQLYNIGMVGRTNENASASDTLKYALVWKKLIERGKIDVKDVALKIGIAPEELTPNIYEACMDPDVRTKIVNWLKAHVYTNACHKGLKVKFKPASSSKDEDGATDGSDTSLISDPGLLDPVAVMSVVAPRRRTANNIRILKDNEVICSSEAVSSENGMPVDKCIVGEPDCGNPGTSNEVSIPEVSEKNLITSQDTLPEVQGCADEVEHSSLAGCISDEKLTICLLKPSMPSEHYLPVCSNSEVPDSGSIRRIEATSSYVHPYISNQLIQLHNSVLSEDIICPRRDRNSSLVESLRASGHSGNQHQHLSGNQHQYLTCLDDCKSDQMNMEQLVRAREMGVFKYSPEDEVEGELIYFQHRLLQNAVKRRQIADNLIFSVAKSLPKEIDTAHQQMWDAVLVNQYTCDLREAKKRGRKERKHKEAQAVLAAATAAAAAPRVSSFRKDSLAESVQQENLVKLDTLSGRAGVCSQPLPRAKETLSRLAVTRTSSEKYSNFSLPSSNLSKEHPRLCDVCRQPETLPNSILVCSSCKVAVHLDCYGSVKETTGPWYCELCGDLSSRNSGASATNSMEKPYLIAECALCGGSSGAFRKSSDGQWIHAFCAEWIFESTFKRGQVNAVEGVETVLKEVDICCICHKHGVCIKCSFGNCQTKFHPSCARRAGFYMNVSTPAGKPHKKPHHKAYCEKHGPEQRAKVAAEAQKHGMEELKSFRQIRVELERLRLLCERTVRREKIKRDLVLCSQDLLASKRDHVARSELAQRSFILPGGSSESATTSLKVNTEGNRSCSEVVQRSDDITVDSSVPDKNHAGVAVSMDTDPKLDDDCSTSPSNYNHKIPEKLQYFGKQVPHRASAISHKLDDGGWRSKSRKLQHAETFGKELVMTSDEASMKNSMLPKGYAYVPADCLSNDDMLSNQDVDANGSVEHDG* 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1100 1443 ProSiteProfiles Extended PHD (ePHD) domain profile. 315 436 IPR034732 -
Lan9g1100 1443 ProSiteProfiles Zinc finger PHD-type profile. 256 308 IPR019787 -
Lan9g1100 1443 PANTHER PHD FINGER PROTEINS 207 444 - -
Lan9g1100 1443 PANTHER PHD FINGER PROTEINS 812 1419 - -
Lan9g1100 1443 ProSiteProfiles Zinc finger PHD-type profile. 1025 1074 IPR019787 -
Lan9g1100 1443 MobiDBLite consensus disorder prediction 478 492 - -
Lan9g1100 1443 ProSitePatterns Zinc finger PHD-type signature. 1028 1071 IPR019786 -
Lan9g1100 1443 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 207 444 - -
Lan9g1100 1443 PANTHER PHD-FINGER DOMAIN CONTAINING PROTEIN FAMILY-RELATED 812 1419 - -
Lan9g1100 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 312 438 IPR013083 -
Lan9g1100 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1093 1206 IPR013083 -
Lan9g1100 1443 CDD ePHD 1096 1204 - -
Lan9g1100 1443 Pfam PHD-zinc-finger like domain 317 435 - -
Lan9g1100 1443 Pfam PHD-zinc-finger like domain 1095 1204 - -
Lan9g1100 1443 SMART PHD_3 380 436 IPR001965 -
Lan9g1100 1443 SMART PHD_3 1027 1072 IPR001965 -
Lan9g1100 1443 SMART PHD_3 1148 1205 IPR001965 -
Lan9g1100 1443 SMART PHD_3 258 306 IPR001965 -
Lan9g1100 1443 SUPERFAMILY FYVE/PHD zinc finger 1016 1071 IPR011011 -
Lan9g1100 1443 Pfam PHD-finger 272 306 - -
Lan9g1100 1443 Pfam PHD-finger 1039 1071 - -
Lan9g1100 1443 ProSiteProfiles Extended PHD (ePHD) domain profile. 1093 1205 IPR034732 -
Lan9g1100 1443 ProSitePatterns Zinc finger PHD-type signature. 259 305 IPR019786 -
Lan9g1100 1443 MobiDBLite consensus disorder prediction 478 503 - -
Lan9g1100 1443 MobiDBLite consensus disorder prediction 1317 1347 - -
Lan9g1100 1443 SUPERFAMILY FYVE/PHD zinc finger 249 306 IPR011011 -
Lan9g1100 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 251 310 IPR013083 -
Lan9g1100 1443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1003 1080 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1100 Lan-Chr9 18383763 18393419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1100 259 441 C2H2 Transcription Factor Family AT3G14740 30.270 8.41e-18 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lan9g1100 zf-HC5HC2H_2 5.3e-23 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1100 - - gmx:100775631 1681.38