Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1096 ATGAACTTTGAACTCATTAGAAGAAACTTTCATATATTTCCTACAATGAGAAAACATAGAACCCATAGAAGAGTCACTAACACCAATGATGTAAACCAAAACCAAAGCCAAAAGCCACAGAAAAGAGAAAAACAAAAACAAGCGTCATGGGCTATGGTAAAAGGCTCATTTACTTGCAAAAATGTCAAAGTTGTAGAACATCAGAAGCAGAAAAAACTTCATGAGTCAAAAGAAAAGAATAAGAAGTGCAAGAAAATTAAATGTCCAGTTTCACTTTGTAATGAAATTAAGGTCATGGCAACAGGAACTTCAGAAGATGTTCATAACAACAGGGACTCAAAGATGAGTGGTGAATACACAAACAATGATGTTTCTTATTCTAGTAGATCCATAAAAGCTCCTCAAAATGAAATCAATGGAATTGTGTATGCTTCTTTTTCTTCTTCTAATTCTTCTGCAAGTGATTCCTTTAGAGGAATGCCATTAAGGAAACTTTCTGGTTGTTATGAGTATAGAATGGTGGTTGACCCTGTTACAGGTTTAACTAGAGACCCTTCTATTCTGAGAGGTACCACTTGTTCTTATTCTGAGTGTGGTGAGATTTTCATGAATGCTGAAAGTTTGGAGCAACATCAGGCTCATAAACATCCAGTTTCTGAGCTTGTTCCAGAAGATACAAGCAAGAACATAGTAGAAATCATATTCAAATCAAGCTGGTTAAAGAAACAATCATCAATATACAAAATTGACCGCATCCTTAAGGTCCAAAACACCCAGAAAACGCTTTCCAAATTTGAAGAATACAGAGATTCAATCAAAGACAAAGCAATACAACATTCTAAGAAACACCCTCGTTGCATAGCAGATGGTAATGAAGTACTAAGGTTCCATTGCACCACTTTTATGTGCACATTAGGCCTAAGTGGCACTTCCAACCTTTGCAACTTAACACCACAATGCAAAGCATGCAACATAATAAAGAATGGTTTCAAGGTCACAGAAGAAGAATCAAAGGGTATATTGACATATGCAACAAGTGGAAAGGCACATGAAAAGGTTGATGAGAATAATGAGAGAAGGGCAATGTTGGTTTGCAGGGTTATAGCAGGGAGGGTGAAGAAGAATGGTGCAGAAAGTGGTAGCATGGAAGATTATGATTCTGTTGTAGTAGGTGATGATGGTGATTATTCAAATTTGGATGAGTTGTATGTTTTCAACCACAGAGCTATACTTCCTTGCTTTGTTGTAATCTATAGAACTTTTTGA 1266 0.3626 MNFELIRRNFHIFPTMRKHRTHRRVTNTNDVNQNQSQKPQKREKQKQASWAMVKGSFTCKNVKVVEHQKQKKLHESKEKNKKCKKIKCPVSLCNEIKVMATGTSEDVHNNRDSKMSGEYTNNDVSYSSRSIKAPQNEINGIVYASFSSSNSSASDSFRGMPLRKLSGCYEYRMVVDPVTGLTRDPSILRGTTCSYSECGEIFMNAESLEQHQAHKHPVSELVPEDTSKNIVEIIFKSSWLKKQSSIYKIDRILKVQNTQKTLSKFEEYRDSIKDKAIQHSKKHPRCIADGNEVLRFHCTTFMCTLGLSGTSNLCNLTPQCKACNIIKNGFKVTEEESKGILTYATSGKAHEKVDENNERRAMLVCRVIAGRVKKNGAESGSMEDYDSVVVGDDGDYSNLDELYVFNHRAILPCFVVIYRTF* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1096 421 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 49 419 - -
Lan9g1096 421 ProSiteProfiles Zinc finger C2H2 type domain profile. 191 216 IPR013087 -
Lan9g1096 421 Gene3D - 217 420 - -
Lan9g1096 421 ProSitePatterns Zinc finger C2H2 type domain signature. 193 216 IPR013087 -
Lan9g1096 421 SUPERFAMILY ADP-ribosylation 218 419 - -
Lan9g1096 421 MobiDBLite consensus disorder prediction 19 46 - -
Lan9g1096 421 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 49 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1096 Lan-Chr9 18260409 18262244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1096 45 421 C2H2 Transcription Factor Family AT1G75710 41.007 7.21e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan9g1096 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1096 - - gmx:100817333 434.876