Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1086 ATGGTTAAGACAGAGAACAAGATCCACACCACTCAACAATCAAAGCCAATGCAATCTTTATCTTCACCACCATCATCAAATGACAATAAGAAGAAGTACAGGGGGGTCAGAATGAGGAGCTGGGGATCATGGGTCTCAGAAATTAGAGCACCAAGCCAGAAAACAAGAATATGGTTAGGATCTTATTCAAATGCTGAGGCAGCAGCAAGAGCTTATGATGCTGCACTTTTATGCCTTAAAGGCTCTTCAGCAAACCTAAACTTCCCTTTAACTTCTTCACATTACATTCCTCAAGAAAACACTGTTATGTCTCCAAAATCAATCCAAAAAGTAGCTGCAGCTGCTGCTAACAGTTTCTTGAACAGTGCTAATAGTAATAGCATTACTCCACCTTCTCATCCTATTGCTTCAACTTCATCATCATTGGTCTCATCACCTTCCTCTCCTTCTCATCGAATAGATGATGATTTCTCAGTACTCTCATCATTTGAGCCATACAGTAGCTGTGATCAAACACATGAGTCAATGGCTATGATGGATTCTTGGTATGGTTTTAATGGGTATGTTGATCAAATGCTAACTGGGGCATTATTTGATATTGGTTCAACTCAGCTGCTTGATGATCTGTATGAAGAAAGCGACATTCGTTTGTGGAACTTCTGCTGA 666 0.4009 MVKTENKIHTTQQSKPMQSLSSPPSSNDNKKKYRGVRMRSWGSWVSEIRAPSQKTRIWLGSYSNAEAAARAYDAALLCLKGSSANLNFPLTSSHYIPQENTVMSPKSIQKVAAAAANSFLNSANSNSITPPSHPIASTSSSLVSSPSSPSHRIDDDFSVLSSFEPYSSCDQTHESMAMMDSWYGFNGYVDQMLTGALFDIGSTQLLDDLYEESDIRLWNFC* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1086 221 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Lan9g1086 221 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Lan9g1086 221 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Lan9g1086 221 MobiDBLite consensus disorder prediction 125 149 - -
Lan9g1086 221 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Lan9g1086 221 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Lan9g1086 221 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Lan9g1086 221 MobiDBLite consensus disorder prediction 1 33 - -
Lan9g1086 221 CDD AP2 31 89 IPR001471 GO:0003700|GO:0006355
Lan9g1086 221 Gene3D AP2/ERF domain 31 91 IPR036955 GO:0003700|GO:0006355
Lan9g1086 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 221 - -
Lan9g1086 221 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF014 11 221 - -
Lan9g1086 221 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1086 Lan-Chr9 18188319 18189211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1086 1 220 AP2-EREBP Transcription Factor Family AT1G21910 46.774 3.15e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan9g1086 AP2 6.8e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1086 - - gmx:100813313 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0506 11 3907964 3908898 Lan9g1086 9 18188319 18189211 LSH