Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1084 ATGGGGAATGAGGACCTAAATGGTGGTGACAAGTTGAGCATGTTTCGTAAGGTGAAGCCTTACCTTGCTATGGTGTCCCTTCAGTTTGGTTATGCTGGGATGTATATCATTACTATGGTTTCTTTCAAACATGGCATGAGCCATTGGATACTTTCAGTGTATCGTCATGTAGTTGCTACTCTTATCATGGCCCCTTTTGCTCTTGTGTTAGAAAGAAAAGTAAGGCCAAAGATGACTCTACCAATCTTCCTTAGACTAGCCGTGCTTGGTTTTCTTGAGCCAGTGCTTGATCAGAATTTGTACAACATGGGGATGAAGTACACCTCAACAACGTTTGCATCCGCTACCGTTAATGTCCTCCCAGCCATTACTTTTATAATGGCACTCATTTTCAGGTTAGAGACAGTGAACTTGAAAAAAATACACAGCTTAGCCAAAGTAATTGGAACTGCTGTAACGGTCTCAGGAGCTATGGTTATGACATTGTACAAAGGCCCTGAACTTCAGATTATAAAGGGACAAAGTGGTAACCAAAATAACAATGCCACCACCGAGGCCTCTAACTGGGTTCTTGGAACACTAATGCTCATTGCAAGTTGTGGTGGTTGGGCTAGCTTCTTTATATTGCAATCTTTTACTTTGAAGTTGTATCCAGCAGAGCTCTCGATGACATCTTGGATTTGTTTTTTGGGTATTTTTGAGGGTGCAATTGCATCCCTTATATTTGAACGTGACATGCGTGTATGGTCCATTGGGTGGGACTCAAGGCTTCTAGCTTGTGTTTATTCTGGAGTGGTTTGTTCTGGAATGGCATACTATATACAAGGAGTAGTAACAAGGGAACGTGGACCAGTATTTGTAACTTCTTTCAGCCCACTATGTATGATTATCACTGCTGCATTGGGTTCTGTTGTCTTGGCTGAGCAAGTTCATCTAGGAAGTATAATTGGAGCTATTATAATTGTGACCGGGCTTTACACTGTGGTATGGGGGAAAAGCAAAGACAGTCTGAACACAAATGAAGGGAAAGGTGAAGGGCAAGAATTGCCAATTAAGGATGATACAAGATCAGGATCAAACAATTTTGAGAGCATAGAGGTCAATGTTCCTGTTCAGATGAAGGGGGTAGGGAAGAGTGTCCTACCTACTGCAAGAACTTAG 1161 0.4203 MGNEDLNGGDKLSMFRKVKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWILSVYRHVVATLIMAPFALVLERKVRPKMTLPIFLRLAVLGFLEPVLDQNLYNMGMKYTSTTFASATVNVLPAITFIMALIFRLETVNLKKIHSLAKVIGTAVTVSGAMVMTLYKGPELQIIKGQSGNQNNNATTEASNWVLGTLMLIASCGGWASFFILQSFTLKLYPAELSMTSWICFLGIFEGAIASLIFERDMRVWSIGWDSRLLACVYSGVVCSGMAYYIQGVVTRERGPVFVTSFSPLCMIITAALGSVVLAEQVHLGSIIGAIIIVTGLYTVVWGKSKDSLNTNEGKGEGQELPIKDDTRSGSNNFESIEVNVPVQMKGVGKSVLPTART* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1084 386 PANTHER WAT1-RELATED PROTEIN 14 359 - -
Lan9g1084 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 333 - -
Lan9g1084 386 MobiDBLite consensus disorder prediction 339 358 - -
Lan9g1084 386 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020|GO:0016021
Lan9g1084 386 Pfam EamA-like transporter family 32 152 IPR000620 GO:0016020|GO:0016021
Lan9g1084 386 PANTHER WAT1-RELATED PROTEIN 14 359 IPR030184 GO:0016021|GO:0022857
Lan9g1084 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1084 Lan-Chr9 18037372 18041682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1084 17 368 Nodulin-like Gene Family AT4G08300 65.266 1.24e-167 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1084 - - gmx:100814921 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0897 2 19485937 19491919 Lan9g1084 9 18037372 18041682 LSH
Lan11g0511 11 3953680 3956934 Lan9g1084 9 18037372 18041682 LSH