Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1073 ATGGAGGTTGTGGATACACCAAAGCTACAACAAGAGCATTTTCATGTGTTAGTGGTAGATGATAGTGTTATTGACAGGAAGATTCTGGAGAGGCTCCTCAGAGATTCTTCATGCAAAGTTACCTTCATGGAATCTGGAGACAAGGCTCTGAAATATCTTGGCTTGCATAATGCTTCCTCAACTTCTTCAGAACATGGAATCAAAGTCAATTTGATAATGACAGACTACAGCATGCCAGGGATGAGTGGCTATGATTTACTCAAACGAATCAAGGAATCTACTTGGAGAGATGTACCAGTAGTGATTATGTCATCAGAAAATATACCTTCCAGAATCAGCATGTGCTTGGAAGGAGGGGCAGAGGAATTTCTATCAAAGCCTCTTCAGTTATCAGATTTGAAGAGGCTTCAGCCCTACTTTATGAAATCCTTTGATAATTCTAGCCAAGAAGACTATGCTAATAGTTCCATTACTTCTAACAATGACAACATCATAAAAAATAATGGCATTAGCAAAATGAAGGGAATGCCAGTTGAACACGGTTTTAAATTATGGTATATTATTGCAATTGCAACCGCAATATTACAGTTTTGGAAGTCTTTATAA 606 0.3779 MEVVDTPKLQQEHFHVLVVDDSVIDRKILERLLRDSSCKVTFMESGDKALKYLGLHNASSTSSEHGIKVNLIMTDYSMPGMSGYDLLKRIKESTWRDVPVVIMSSENIPSRISMCLEGGAEEFLSKPLQLSDLKRLQPYFMKSFDNSSQEDYANSSITSNNDNIIKNNGISKMKGMPVEHGFKLWYIIAIATAILQFWKSL* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1073 201 CDD REC_typeA_ARR 16 136 - -
Lan9g1073 201 Pfam Response regulator receiver domain 16 134 IPR001789 GO:0000160
Lan9g1073 201 SMART REC_2 14 137 IPR001789 GO:0000160
Lan9g1073 201 Gene3D - 15 150 - -
Lan9g1073 201 ProSiteProfiles Response regulatory domain profile. 15 141 IPR001789 GO:0000160
Lan9g1073 201 PANTHER TWO-COMPONENT RESPONSE REGULATOR ORR4 8 169 - -
Lan9g1073 201 SUPERFAMILY CheY-like 14 136 IPR011006 -
Lan9g1073 201 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 169 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1073 Lan-Chr9 17954933 17958202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1073 4 143 Response Regulator Gene Family AT1G19050 61.702 5.93e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan9g1073 Response_reg 3.1e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1073 K14492 - gmx:100790440 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0885 2 19350834 19354056 Lan9g1073 9 17954933 17958202 LSH