Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1070 ATGCAAATGTCGAAGTCTCCCTCTTCTCCAGAACAACGGCCGTCCATTTCTTCTTATCTTTCTCAGCCTAGGGAATTTAATGAGGCAACAGGAATGGACGACCCAGAATCTATAATGGCGACAGTTGCTAATTTTGTAGAGCAGTTGCATACCAACTTTTCATCACCACTTGAGAAAGAAATTATTACTGCACGCTTGCTAGGTATTGTCAGGGGAAGAAAGGATGCTAGAGAACTTATTGGCTCTCATACCCAAGCCATGCCATTGTTCATAAACATTCTCAGAAATGGAACTCCTCTTGCAAAAGTTAATGTTGCTGCCACTCTCAGTGTCCTGTGCAAAGATGAAGAACTAAGATTAAAAGTACTTCTTGGTGGTTGTATCCCACCTTTACTGTCACTCTTAAAATATGAATCCACTGATGCCAGGAAGGCAGCAGCTGAAGCAATATATGACGTTTCCTCTGATGGTCTTTCGGATGATCATGTTGGTATGAAGATTTTTGTTACAGAAGGTGTAGTCCCAACCTTATGGAATCAACTAAATCCAAATAACAAGCAAGATAAAGTTGTGGAGGGCTTTATTACTGGAGCATTAAGAAATCTGTGTGGTGACAAAGATGGCTACTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATTATTGTGGGTCTCTTGTACTCGGACAATGCTGTTTCTCAGTCAAATGCAGCTTCTCTATTGGCACGTTTAATGCTGGCTTTCAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAGTCAAAGCTTTACTTCAGCTTGTTGGTCAGGAAAATGATATTTCTGTACGAGCTAGTGCTGCTGATGCCCTACAGGCCCTATCTTCAAAGTCAATTAAGGCCAAGGAAGCTATTGTTAGTGAAGATGGTCTACCGATCCTTATTGGAGCTATAGTTGCTCCTTCTAAAGAGTGTATGCATGGTGATGGTGGTCAGGCTCTGCAGGAGCATGCAACTAGAGCATTATCCAATATCTGTGGTGGGATGTCTGCTTTAATACTATATCTTGGAAAACTTTCCCATTCTCCTCGCCTTTCTGCGCCAGTTGGTGATATAATTGGTGCTCTTGCTTATACACTCATGGTCTATGAGGAAAAAGTTGATGCTGACGTGGACCACTTGAATGTAACTAAGATAGAGGATACTCTAATAACACTTTTAAAGCCTCAAGACAACATGCTGATTCAAGAACGTGTCCTCGAGGCTATGGCTAGCCTATATGGTAACGTCTGTCTCTCAAAGTGGCTCAATCAGGCAGATTCAAAGAAGGTCCTTATTGGACTTATAACCATGGCTGTCACTGATGTGCAAGAATATCTTATACTTTCATTGACAAGCTTGTGTTGTGATGGGGTAGGAATATGGGAGGCTATAAAAAAGAGAGAAGGTATCCAATTACTTATATCATTGCTGGGATTATCTAGTGAGCAGCATCAAGAGTACTCAGTTCAGTTGCTAGCAATCTTAACCCACCAGGTCGATGACAGCAAGTGGGCAATCACTGCTGCTGGAGGGATTCCACCATTGGTGCAGCTGTTGGAGACAGGATCACAGAAAGCAAGAGAGGAAGCAGCTAATATCCTGTGGAGTTTGTGCTGTCACAGTGAAGATATTCGTGCATGTGTTGAAAGTGCTGGGGCCATCCCGGCATTTTTGTGGCTTCTTAAGAGTGGTGGACCAAAAGGACAAGAAGCATCTTCTATGGCACTCACAAAGCTTGTCCAATTAGCTGATTCTGCCACAATTAATCAGCTATTAGCATTGCTCCTAGGGGATTCTCCAAGCTCGAAGGCCCATATAATCCGAGTTTTAGGTCATGTACTTGCCTTGTCTTCAGCAAACGATCTCCTGCAAAAGGGTTCTGCAGCTAATAAAGGCTTGAGATCTCTTGTCCAAGTTCTCAACTCATTGAATGAGGAAACCCAAGAGTATGCAGCCTCAGTCCTAGCTGATTTATTTATCATCAGACAAGACATTTGTGACAGTCTTGCAACTGACGAGGTTGTGCTTCCTTGCATGAAGCTTCTGACCAGCAAAACTCAAGCTGTTGCCACTCAGTCAGCTCGAGCATTAAGTGCTTTGTCCCGTCCAACTAAAAACAAAGCTGCAAATAAGATGTCTTATATTTTAGAGGGGGACGTCAACCCACTAATCAAGTTGGCTAAGACATCCTCTGTTGATGCTGCTGAAACTGCCGTTGCTGCATTGGCCAATCTTCTCTTTGATCCTTTTATTGCTGCTGAGGCTCTGGCTGAAGATGTTGTTTCAGCTATAACACGAGTTCTAGCAGAAGGAACCTTAGAAGGTAAGCAAAATGCATCTCGTGCGCTCCATCAATTATTGAAGCATTTTGCTTTAGGTGAAATTCTCAAGGGGAATGCACTATGCCATTTCACTGTGCTTGCACTTGTTGATTCCTTAAGAGTCATGGATATGGATGGAACTGATACTGCAAATGCTTTAGATGTAATTTCTTTGCTAGCAAGGACTAAACAAGGTGTCAACTTTACTTATCCTCCATGGTCGGTTCTAGCCGAATTGCCATCAAGCTTTGAACCCCTTATTCGCTGCCTGTCTGAGGGGCCTCCCCTTGTTCAGGACAAGGCAATTGAGGTTCTGTCTAGACTTTGTAGAGATCAGCCTGTCGTACTTGGTGATTTGTTATCTTCTAGTTCTAGATCCATTGGTTCATTAGCTACTAGAATAATGAACTCCTCCAGTTTAGAAGTAAAAGTTGGAGGTGTTGCCTTACTAATTTGTGCTGCAAAGGAAAAGAAAGAGCTTTCAGTGGATTTACTTGACGCTTCTGGGTTCCTAAAACCATTAATATGTTCTTTAGTTGATATGATGAAACATAATTGTAGCTGCTCTTCGTTAGAAATTGAAGTTCACCCTCCTAGAGGTTTTATGGAGAGAAATGCATTTCAAGAATTTGATGAATTTGATATTCTGGACCCGGCTATGGTGTTGGGAAGTAATGTAGCCTTGTGGTTACTCTCAATTATTGCTTCTCTCCATATAAACACCAAACTCGAAATTATGGAAGCTGGCGGTCTCGAAGCTCTCTCTGACAAACTTGCAAGACACACTTCAAATCCACAGGCAGAATATGAGGATACAGAAGGAATATGGATCAGTGCCTTGCTCTTGGCCATTTTATTTCAAGATGCAAACATTGTTCTATCTCCTGCTACAATGCGCATTATATCTTCTCTCACTCTTCTGCTAAGATCAGATGAAATGATTGATAAGTATTTTGCTGCCCAGGCTATGGCTAGTCTTGTTTGTAATGGTAATAAGGGAATAGATCTTGCCATTTCAAATTCCGGTGCTGTTGCTGGATTGATAACTATTATTGGGCATATAGAGTCAGATATGTCAAACTTGACAGGTTTATCAGAGGAATTCTCTCTGGTACAAAACCCTGATCAGGTTGTCTTGGATCATCTTTTTGAAATTGAAGATGTAAGAGTGGGATCTACTGCAAGGAAATCAATACCACTCTTGGTGGATCTCTTGAGACCAATAGCAGAAAGGCCTAGTGCTCCACCAGTAGCTGTTAGACTCTTGATATCCATTGCAAATGGAAGTGACACAAATAAATTAATTTTGGCTGAAGCTGGAGCTCTTGAAGCTTTGAACAAGTACCTGTCCTTGAGCCCTCAAGAATCAACTGAGGCTGCTATTTCTGAGTTATTGAGAATATTATTTTGCAATTCTGATCTTCTTAAACATGAATCAACAACAAGTTCGTTGAACCAACTCATGGCTGTTTTGCGCCTTGGATCAAGAAATGGTAGATATAATGCAGCAAGAGCACTTCATGAGCTTTTCAATGCTGAGAGCATTAGGGACTCGGAGCTAGCTAAACAGGCCATTCAGCCGTTGGTTGACATGCTTAATACAACATCAGGGAGCGAGCAGGAGGCTGCTCTCATGGCCTTGATCAAGTTAACCTCCGAAAATTCTTCAAAAGCATCTCTTTTTACTGATGTGGAAGGCAACCCGCTAGAAAGTTTATACAGAATATTGTCTTCTACTGCTTCATCCTTGGAACTGAAGAGCCATGCTGCACAACTCTGCTTTGCTCTTTTTTGTAATAGCAAAATCAGGGCAGATCCAATTGCCGCGGAATGCGTAGAACCTCTTATATCACTGGTGCAATCTGCTACTGGGACAGCAATTGAATATGGGGTTTGTGCTTTTGAGAGATTGTTGGAAGATGAACAACAGGTAGAGCTAGCAGCAGCCTATAATGTTGTGGATCTCCTTGTCAGCTTGGTTTCTGGTACAAACTATCAGCTTGTTGAGGCTACCATATCTGCTCTCATCAAATTGGGCAAAGACAGAACTCCTAGCAAACTAGACATGGTCAAAGCTGGCATTATTAATAATTGTCTCAAGCTACTCGAATCAGCTCCTAGCTCATTATGCTCCACAATTGCGGAGCTGTTTCGCATTTTAACTAATAGTAATGCAATTGCTAGAGGTTCAGATGCTGCAGAAATTGTAGAACCCCTTTTCCATGTTTTGCTCCGTCGAGATTTCAACTTATGGGGACAGCATAGTGCCTTACAAGCACTAGTGAATATATTGGAGAAGCCACAGAGTCTTGCAACCTTAAATCTTACTCCTAGCCAAGTTATTGAACCTTTGATTTCATTTCTGGAATCCCCATCCCAAGCTATTCAGCAGCTTGGCACAGAACTTTTATCTCATCTCCTTGCACAAGAACATTTTCAGCAAGATATTACAACAAAGAATGCAGTTGTGCCTCTTGTACAACTATCAGGAATTGGAATATTAAACTTACAACAAACAGCAATAAAAGCATTGGAAAAAATTTCCAAGAGCTGGCCGAAGGCAGTTGCTGATGCGGGAGGTATTTTTGAGCTTGCAAAGGTTATTATTCAAGATGACCCTCACCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTTTTACGTTCCAATGCTGATTACTATTTTAAAGTTCCTGTGGTGGTTCTTGTTAAACTGTTGCTCTCAACAAGTGACAGTACAATTACCATAGCCCTTGATGCTTTAACAGTTCATGAAAGAAGTGATGCTACAAGTGCTGAACAGATGGTGGAAGCTGGAGCTATAGATACACTGTTGGAGCTTTTAAGATCTCATCATTGTGAAGAAGCATCTGCTAGATTACTTGAAGCTTTATTTAACAATGTGAGAGTACGAGAGATGAAGGTATCTAAGTATGCTATAGCACCTTTATCACAGTATCTGTTAGACCCACAAACCAAATCACAGCCTGGCAAGCTTCTTACTGCTTTAGCCCTGGGAGATATATCCCAGCATGAGGGGCATGCTCGATATAGTGAGTCTGTTTCTGCATGTCGCGCATTGATAAGTTTACTTGAAGATCAGTCAACTGAAGAAATGAAGATGGTGGCTATATGTGCATTGCAAAACTTCATCATGAACAGCAGAACCAATAGACGAGCTGTTGCAGAAGCTGGGGGCATACTGGTGATTCAAGAATTGCTACTGTCTCCAAATATCGAAGTTGCTGGACAAGCAGCATTACTACTCAAATTTTTGTTTTCTACTCACACACTTCAAGAATACGTGTCAAATGAGCTGATCAGATCCTTGACAGCTGCACTGGAAAGAGAGTTGTCGTCAACTGCCACAATGAACGAAGTGGTTTTAAAAACTCTGCATGTGATATTCATGAACTTCCCTAAGCTCCACATATCTGAAGCAGCAACCCTTTGCATTCCTCATTTGGTAGGAGCACTTAAATCTGGTGGTGAAGCTGCTCAGGACTCTGTACTTGACACCTTTTGCTTGCTAAGACAGTCTTGGTCAACTATGGAAATAGATCTAGCAAAGTCTCAAGCTATGATTGCTGCTGAAGCCATCCCCATCTTGCAAATGCTCATGAAAACTTGTCCACCAAGCTTCCATGAGAGGGCAGATGCTCTTTTGCACTGCTTACCAGGTTGCTTAACTGTCACCATTGAGCGTGGAAACAACCTCAAACAAACTATGGGAAGCACAAATGCATTCTGCCTGTTGACAATAGGCAATGGTCCTCCAAAACAAACCAAGGTATTGAATCGTAGTACTTCTCCAGAATGGAAAGAAGGATTCACATGGGAATTTGATGTACCTCCAAAGGGCCAAAAGCTCCATATTATATGCAAAAGCAAGAACACTTTTGGCAAGTCAACTCTTGGAAGAGTCACTATTCAAATTGATAAAGTTGTGACAGAAGGGGTTTATAGTGGATTATTCAGTCTTAATCATGACACCAACAAAGATGGTTCTTCCCGGACTCTTGAAATTGAGATTATATGGTCCAACAGGATTTCTAATGAGGATATCTGA 6423 0.4179 MQMSKSPSSPEQRPSISSYLSQPREFNEATGMDDPESIMATVANFVEQLHTNFSSPLEKEIITARLLGIVRGRKDARELIGSHTQAMPLFINILRNGTPLAKVNVAATLSVLCKDEELRLKVLLGGCIPPLLSLLKYESTDARKAAAEAIYDVSSDGLSDDHVGMKIFVTEGVVPTLWNQLNPNNKQDKVVEGFITGALRNLCGDKDGYWKATLEAGGVDIIVGLLYSDNAVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLQLVGQENDISVRASAADALQALSSKSIKAKEAIVSEDGLPILIGAIVAPSKECMHGDGGQALQEHATRALSNICGGMSALILYLGKLSHSPRLSAPVGDIIGALAYTLMVYEEKVDADVDHLNVTKIEDTLITLLKPQDNMLIQERVLEAMASLYGNVCLSKWLNQADSKKVLIGLITMAVTDVQEYLILSLTSLCCDGVGIWEAIKKREGIQLLISLLGLSSEQHQEYSVQLLAILTHQVDDSKWAITAAGGIPPLVQLLETGSQKAREEAANILWSLCCHSEDIRACVESAGAIPAFLWLLKSGGPKGQEASSMALTKLVQLADSATINQLLALLLGDSPSSKAHIIRVLGHVLALSSANDLLQKGSAANKGLRSLVQVLNSLNEETQEYAASVLADLFIIRQDICDSLATDEVVLPCMKLLTSKTQAVATQSARALSALSRPTKNKAANKMSYILEGDVNPLIKLAKTSSVDAAETAVAALANLLFDPFIAAEALAEDVVSAITRVLAEGTLEGKQNASRALHQLLKHFALGEILKGNALCHFTVLALVDSLRVMDMDGTDTANALDVISLLARTKQGVNFTYPPWSVLAELPSSFEPLIRCLSEGPPLVQDKAIEVLSRLCRDQPVVLGDLLSSSSRSIGSLATRIMNSSSLEVKVGGVALLICAAKEKKELSVDLLDASGFLKPLICSLVDMMKHNCSCSSLEIEVHPPRGFMERNAFQEFDEFDILDPAMVLGSNVALWLLSIIASLHINTKLEIMEAGGLEALSDKLARHTSNPQAEYEDTEGIWISALLLAILFQDANIVLSPATMRIISSLTLLLRSDEMIDKYFAAQAMASLVCNGNKGIDLAISNSGAVAGLITIIGHIESDMSNLTGLSEEFSLVQNPDQVVLDHLFEIEDVRVGSTARKSIPLLVDLLRPIAERPSAPPVAVRLLISIANGSDTNKLILAEAGALEALNKYLSLSPQESTEAAISELLRILFCNSDLLKHESTTSSLNQLMAVLRLGSRNGRYNAARALHELFNAESIRDSELAKQAIQPLVDMLNTTSGSEQEAALMALIKLTSENSSKASLFTDVEGNPLESLYRILSSTASSLELKSHAAQLCFALFCNSKIRADPIAAECVEPLISLVQSATGTAIEYGVCAFERLLEDEQQVELAAAYNVVDLLVSLVSGTNYQLVEATISALIKLGKDRTPSKLDMVKAGIINNCLKLLESAPSSLCSTIAELFRILTNSNAIARGSDAAEIVEPLFHVLLRRDFNLWGQHSALQALVNILEKPQSLATLNLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVQLSGIGILNLQQTAIKALEKISKSWPKAVADAGGIFELAKVIIQDDPHPPHALWESAALVLSNVLRSNADYYFKVPVVVLVKLLLSTSDSTITIALDALTVHERSDATSAEQMVEAGAIDTLLELLRSHHCEEASARLLEALFNNVRVREMKVSKYAIAPLSQYLLDPQTKSQPGKLLTALALGDISQHEGHARYSESVSACRALISLLEDQSTEEMKMVAICALQNFIMNSRTNRRAVAEAGGILVIQELLLSPNIEVAGQAALLLKFLFSTHTLQEYVSNELIRSLTAALERELSSTATMNEVVLKTLHVIFMNFPKLHISEAATLCIPHLVGALKSGGEAAQDSVLDTFCLLRQSWSTMEIDLAKSQAMIAAEAIPILQMLMKTCPPSFHERADALLHCLPGCLTVTIERGNNLKQTMGSTNAFCLLTIGNGPPKQTKVLNRSTSPEWKEGFTWEFDVPPKGQKLHIICKSKNTFGKSTLGRVTIQIDKVVTEGVYSGLFSLNHDTNKDGSSRTLEIEIIWSNRISNEDI* 2141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1070 2140 PANTHER - 11 2139 - -
Lan9g1070 2140 Gene3D - 1156 1422 IPR011989 -
Lan9g1070 2140 Gene3D - 160 369 IPR011989 -
Lan9g1070 2140 Gene3D - 862 1155 IPR011989 -
Lan9g1070 2140 SUPERFAMILY ARM repeat 1592 2010 IPR016024 -
Lan9g1070 2140 SMART C2_3c 2013 2109 IPR000008 -
Lan9g1070 2140 SUPERFAMILY ARM repeat 1179 1550 IPR016024 -
Lan9g1070 2140 Pfam Armadillo/beta-catenin-like repeat 510 545 IPR000225 GO:0005515
Lan9g1070 2140 MobiDBLite consensus disorder prediction 1 21 - -
Lan9g1070 2140 ProSiteProfiles C2 domain profile. 1993 2110 IPR000008 -
Lan9g1070 2140 SMART arm_5 1210 1250 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 627 667 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 290 340 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 1548 1589 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 1713 1754 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 1839 1879 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 462 504 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 1292 1333 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 755 795 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 548 588 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 248 289 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 1421 1461 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 115 155 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 714 754 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 506 546 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 205 246 IPR000225 GO:0005515
Lan9g1070 2140 SMART arm_5 160 204 IPR000225 GO:0005515
Lan9g1070 2140 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 11 2139 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Lan9g1070 2140 CDD C2 2014 2104 - -
Lan9g1070 2140 SUPERFAMILY ARM repeat 516 797 IPR016024 -
Lan9g1070 2140 Gene3D - 628 805 IPR011989 -
Lan9g1070 2140 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1177 1221 IPR000225 GO:0005515
Lan9g1070 2140 Pfam C2 domain 2013 2112 IPR000008 -
Lan9g1070 2140 Gene3D C2 domain 2013 2139 IPR035892 -
Lan9g1070 2140 SUPERFAMILY ARM repeat 74 312 IPR016024 -
Lan9g1070 2140 Gene3D - 33 159 IPR011989 -
Lan9g1070 2140 Gene3D - 1615 2012 IPR011989 -
Lan9g1070 2140 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2011 2117 IPR035892 -
Lan9g1070 2140 Gene3D - 1423 1609 IPR011989 -
Lan9g1070 2140 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 517 559 IPR000225 GO:0005515
Lan9g1070 2140 Gene3D - 378 627 IPR011989 -
Lan9g1070 2140 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 259 303 IPR000225 GO:0005515
Lan9g1070 2140 SUPERFAMILY ARM repeat 861 1127 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1070 Lan-Chr9 17916706 17932860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1070 407 793 U-box Gene Family AT3G46510 21.921 8.66e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1070 - - aprc:113846793 3568.47