Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1066 ATGGCTAAGAAACGAACACCACTTACCAATCTCACAAATCATAAAACCTTTGCGCCTCGTAACTCTACTTTGGTACCATGTTCAACTAAGATTGTCAAGACCAAACAAGAGCCTCCTCATCTTACCAGCACAACATCCTCAGCAAGTAGGAATAAATTTCCCTCATTGCAGAATGTTAAATCAAGCAAAGTTGTTTTTCCTAAAGTTACTTCTTTACCACAAAGGAATGATGCTGGTGCTGCTCCTAGTCCTATAGTAGCAACTGTCACTGTGTTTGTTCCAAGCAGCATTGATGTTTCTCCAAGTAAATCAGATGGGATGTCTGTTTCTATGGATGACTCAGACTCTTCCTGTGATTCTATCAGGAGTCCTGAAGTTGAATATATAGATAACACTGATGTTTCAGCTGTTGATTTAGTTCAGAGAAAGACAATCAGCAATTTCAACATCTCTGACACTACTTTGGAATCAACAGGTAACATCAGTAGTAGAGACATCAATGTTGAGTTGGAAAGAGATGATAAAATTGTCAATATTGATAAAAATTACATGGATCCGCAGCTTTGTGCAACCTATGCTTGTGATATCTACAAACACCTTCGTGCATCTGAGGTAAAGAAAAGGCCTTCCACAGATTTCATGGAAAGGATTCAGAAGGAGATAAATATCAGCATGCGTGCTATATTGATTGATTGGCTTGTGGAGGTGGCTGAGGAGTATCGGCTTGTACCTGAAACATTGTATTTAGCAGTTAACTATATAGATAGATATCTTTCAGGGAATGCTGTGAATAGGCAAAAGTTGCAATTACTTGGGGTTGCGTGCTTCATGATTGCCTCTAAATATGAAGAGATTTGTGCACCTCAGGTGGAGGAGTTTTGCTTTATAACTGATAAGACATACTTGAAAGAAGAGCCAAGTAATTTGATGCAGATTTTGCAAATGGAATCTTCTGTCTTGAATTATCTCAAATTTGAAATGACAGCCCCAACAACTAACTGTTTCCTAAGACGATTTATTCGTGCAGCTCAAGATGTCGATGAGGTTCCTTCATTGCAACTGGAGTGCTTGACCAACTATATTGCCGAATTGTCTCTCTTGGAGTACAGTATGCTTTGCTATGCACCATCACTTATAGCAGCTTCTGCAGTTTTCCTTGCCAAATTTATACTCTTCCCTTCAAAGAAACCATGGAGTTCCACTTTACAGCATTTCACACAATACCGGCCTTCTGATTTGTGTCGATGTGTCAAGGATCTCCATCGTCTTTGTTGCAACAGGCCTGCTTCTAATTTACCTGCAATCCAAGAGAAATACAGTCAGCACAAGTATAAATATGTGGTGAAGAAGTATTGCCCTCCTTCAATACCTCAAGAATATTTCCTGAATTGA 1392 0.3922 MAKKRTPLTNLTNHKTFAPRNSTLVPCSTKIVKTKQEPPHLTSTTSSASRNKFPSLQNVKSSKVVFPKVTSLPQRNDAGAAPSPIVATVTVFVPSSIDVSPSKSDGMSVSMDDSDSSCDSIRSPEVEYIDNTDVSAVDLVQRKTISNFNISDTTLESTGNISSRDINVELERDDKIVNIDKNYMDPQLCATYACDIYKHLRASEVKKRPSTDFMERIQKEINISMRAILIDWLVEVAEEYRLVPETLYLAVNYIDRYLSGNAVNRQKLQLLGVACFMIASKYEEICAPQVEEFCFITDKTYLKEEPSNLMQILQMESSVLNYLKFEMTAPTTNCFLRRFIRAAQDVDEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAVFLAKFILFPSKKPWSSTLQHFTQYRPSDLCRCVKDLHRLCCNRPASNLPAIQEKYSQHKYKYVVKKYCPPSIPQEYFLN* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1066 463 ProSitePatterns Cyclins signature. 226 257 IPR006671 -
Lan9g1066 463 MobiDBLite consensus disorder prediction 32 53 - -
Lan9g1066 463 CDD CYCLIN 225 320 IPR013763 -
Lan9g1066 463 SUPERFAMILY Cyclin-like 185 327 IPR036915 -
Lan9g1066 463 PANTHER CYCLIN-A1-1 2 461 - -
Lan9g1066 463 Gene3D - 195 447 - -
Lan9g1066 463 Gene3D - 209 328 - -
Lan9g1066 463 Pfam Cyclin, N-terminal domain 195 327 IPR006671 -
Lan9g1066 463 PANTHER CYCLINS 2 461 IPR039361 -
Lan9g1066 463 SUPERFAMILY Cyclin-like 330 454 IPR036915 -
Lan9g1066 463 PIRSF Cyclin_A_B_D_E 2 459 IPR039361 -
Lan9g1066 463 SMART Cyclin_C_2 330 453 IPR004367 -
Lan9g1066 463 CDD CYCLIN 328 421 IPR013763 -
Lan9g1066 463 SMART cyclin_7 334 422 IPR013763 -
Lan9g1066 463 SMART cyclin_7 231 315 IPR013763 -
Lan9g1066 463 Pfam Cyclin, C-terminal domain 330 447 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1066 Lan-Chr9 17898224 17902684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1066 1 463 Core Cell Cycle Gene Families AT1G44110 58.369 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1066 K06627 - gmx:547781 627.861