Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1065 ATGGATAAGCATTTGATTCTAATGTCTATGTTCACCATTTTGATAGCTGGTGCTTCTGCAGCATCTTCTTCATGTCCTATGGATCTCAGCTATGTTGAGACCTTTCCTTGGGACACTTCAACATGTAGAGACCCTATTGATACTCAACACTGTTGCCAAACTCTTCTTAGCCTCTTTGGAATAGGCCTTGCACAACACCTCAAAGAAACTTCAATGTTTCAACTATCTAATGAAAACACTTCATCAACTTGTTTATCTGATTTCAAAACCATGCTTTCAGCCTTGTCACTCCAACCCTCTTTGGTCCCTTCATGCTTCCAAAACTCTACTCAGTTTGTTACCAACACTTCAAGCTGTGCTGGTATTGTGAATATAAGTGATTGGAAGCAAAAAGTAGGTACTTTAACCCCTTTAGACACATCTTGCAATGGTGATATGAAGGTGCAAACTAGGTGCAGTATTTGCACTGATGCTGGATTCAAAGTGACTTCACAACTCACAAGTATTGATCCAAATAATTCCACAAAGTGTTTTTACTTCTCAATCTTATATGCTGCTGCTATTGTTAATGAGTTAGGTCCTACAGATATAGGCACTGCAAGTTGCATACTAGGCTTGCCACTTTCTAATTCAGCAACTTCAAATAAGAAACAAGTTTTGAAGATTGTTGTGGGGTTAATTGGTGCTCTTGTTGGTGTAGTGCTTGGTTTTGTGCTCATAATAATGTATAGGAAGTGGGATAAGAGAAGGAAAGAGGATAATATTCATAGGTCTATTGAAAATAGTGTTAGAGCAAGTGTTTTGCCTAATGCTGGTGCAAAATGGTTTCACATATCAGAGCTTGAAAGAGCAACAAACAAGTTTTCACAGAAGAATATGATTGGTCAAGGTGGTGATGGTGTTGTGTACAAAGGTACTCTCCAAGATGGCACTTTGGTTGCAGTTAAGGAGATTTTTGGTTTAGAAACAAAAGGAGATGAAGAGTTTTGCTATGAAGTTGAAATCATAAGCAAAATAAAGCACAGAAACCTTGTTGCTCTAAGGGGTTGTTGTGTTACAAGTGATAACTCAAAGGGTAAGAGAAGGTTTCTTGTTTATGATTATATGCCTAATGGAAGCCTAAGTTATCAATTATCTATTGCTGGGGCTAATAGGCTAACATGGCCACAGAGAAAGAATATAATCATTGATGTTGCTAAAGGGCTATCTTATCTGCATTATGAAATCAAACCTCCGATTTATCACCGAGACATAAAAGCGACAAACATACTTCTGGATTCAAAGATGAAAGCTAAAGTGGCAGATTTTGGATTGGCAAAGCAAGGTAGTGAAGGACAGTCTCATCTTACAACAAGGGTTGCTGGCACATATGGTTATTTAGCACCAGAATATGCTCTATATGGCCAACTAACAGATAAAAGTGATGTCTATAGCTTTGGTATTGTGATACTTGAAATCATGAGTGGAAGAAAAGTGCTTGATAGTAACATGAGTTCTTCCTTGGTTCTAATCACAGACTGGGCATGGACACTTGCAAAATCAGGAAAAACTGATGAGATTCTTGATGAATCAATAAGAGAACAAGGGCCAGAAAAAATCATGGAAAGGTTTGTGCTTGTTGGAATTCTTTGTGCTCATGCAATGGTGGCATTAAGGCCTACTGTTGCTGAGGCTCTAAAGATGTTAGAAGGCGATATCGACATTCCTGAATTACCAGATAGGCCAGTACCACTTGGTCATGAATCATTTCAATCTTCTCTGTTGGCTGGTATGCAAAGAAGTGGAAGATCTTCACCATATACCATGTCATCTTATTCAACTAGTATGAGCACATTATAG 1839 0.3828 MDKHLILMSMFTILIAGASAASSSCPMDLSYVETFPWDTSTCRDPIDTQHCCQTLLSLFGIGLAQHLKETSMFQLSNENTSSTCLSDFKTMLSALSLQPSLVPSCFQNSTQFVTNTSSCAGIVNISDWKQKVGTLTPLDTSCNGDMKVQTRCSICTDAGFKVTSQLTSIDPNNSTKCFYFSILYAAAIVNELGPTDIGTASCILGLPLSNSATSNKKQVLKIVVGLIGALVGVVLGFVLIIMYRKWDKRRKEDNIHRSIENSVRASVLPNAGAKWFHISELERATNKFSQKNMIGQGGDGVVYKGTLQDGTLVAVKEIFGLETKGDEEFCYEVEIISKIKHRNLVALRGCCVTSDNSKGKRRFLVYDYMPNGSLSYQLSIAGANRLTWPQRKNIIIDVAKGLSYLHYEIKPPIYHRDIKATNILLDSKMKAKVADFGLAKQGSEGQSHLTTRVAGTYGYLAPEYALYGQLTDKSDVYSFGIVILEIMSGRKVLDSNMSSSLVLITDWAWTLAKSGKTDEILDESIREQGPEKIMERFVLVGILCAHAMVALRPTVAEALKMLEGDIDIPELPDRPVPLGHESFQSSLLAGMQRSGRSSPYTMSSYSTSMSTL* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1065 612 SMART serkin_6 288 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1065 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Lan9g1065 612 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 17 590 - -
Lan9g1065 612 SUPERFAMILY Protein kinase-like (PK-like) 273 578 IPR011009 -
Lan9g1065 612 Pfam Protein kinase domain 289 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan9g1065 612 PANTHER OS01G0253100 PROTEIN 17 590 IPR045271 GO:0004714|GO:0006468
Lan9g1065 612 Gene3D Transferase(Phosphotransferase) domain 1 369 568 - -
Lan9g1065 612 Pfam SPARK 20 178 IPR043891 -
Lan9g1065 612 Gene3D Phosphorylase Kinase; domain 1 249 368 - -
Lan9g1065 612 CDD STKc_IRAK 294 564 - -
Lan9g1065 612 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 25 - -
Lan9g1065 612 MobiDBLite consensus disorder prediction 591 612 - -
Lan9g1065 612 ProSiteProfiles Protein kinase domain profile. 288 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1065 Lan-Chr9 17893802 17895923 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g1065 18 592 Receptor kinase-like Gene Family AT1G11050 52.745 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Lan9g1065 Pkinase 2.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1065 - - ccaj:109788171 947.577